Published November 7, 2021
| Version v2.0
Software
Open
nowling-lab/asaph: v2.0
Description
Stable release of v2.0.
Major changes in v2.0 include:
- New boundary detection algorithm that enables precise localization of inversions
- Use feature hashing to construct reduced dimensionality feature matrix which significantly reduces memory usage
- Use scipy's one-way ANOVA test for association testing which is much, much faster
- Refactor code so that it is installable with setuptools
- Refactor scripts and their commands for easier understanding
- Updated inversion benchmarks to add Plink bed and inveRsion text output formats
- Improved documentation
Files
nowling-lab/asaph-v2.0.zip
Files
(63.0 kB)
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md5:01d88eee9e88341d2cbd8ddc4370f32e
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Additional details
Related works
- Is supplement to
- https://github.com/nowling-lab/asaph/tree/v2.0 (URL)