Published October 25, 2021 | Version v1
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Data from: Spectroscopic approach to correction and visualisation of bright-field light transmission microscopy biological data

  • 1. University of South Bohemia in České Budějovice
  • 2. Charles University

Description

The most realistic information about the transparent sample such as a live cell can be obtained only using bright-field light microscopy. At high-intensity pulsing LED illumination, we captured a primary 12-bit-per-channel (bpc) response from an observed sample using a bright-field wide-field microscope equipped with a high-resolution (4872x3248) image sensor. In order to suppress data distortions originating from the light interactions with undesirable elements in the optical path, poor sensor reproduction (geometrical defects of the camera sensor and some peculiarities of sensor sensitivity), this uncompressed 12-bpc data underwent a kind of correction after simultaneous calibration of all the parts of the experimental arrangement. Moreover, the final intensities of the corrected images are proportional to the photon fluxes detected by a camera sensor. It can be visualized in 8-bpc intensity depth after the Least Information Loss compression [Lect. Notes Bioinform. 9656, 527 (2016)].

Notes

Funding provided by: Ministerstvo Školství, Mládeže a Tělovýchovy
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100001823
Award Number: CENAKVA LM2018099

Funding provided by: European Regional Development Fund
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100008530
Award Number: Image Headstart ATCZ215: Interreg V-A Austria–Czech Republic

Funding provided by: GAJU*
Crossref Funder Registry ID:
Award Number: 017/2016/Z

Funding provided by: Charles University
Crossref Funder Registry ID: http://dx.doi.org/10.13039/100007397
Award Number: UNCE/SCI/010

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Additional details

Related works

Is cited by
10.3390/photonics8080333 (DOI)
Is derived from
10.5281/zenodo.4843452 (DOI)
Is source of
10.5281/zenodo.4843454 (DOI)