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Published October 20, 2021 | Version v0.3.1
Software Open

USDA-ARS-GBRU/GuideMaker: v0.3.1

Authors/Creators

  • 1. University of Florida
  • 2. @USDA-ARS-GBRU

Description

  • Added multiprocessing support for Doench scoring of guides
  • Refactored doench_featurization.py to calculate nucleotide features more efficiently
  • Modified cfd_score_calculator.py to only open the scoring matrix from the file once for increased performance
  • Simplified logging for target scoring modules

Files

USDA-ARS-GBRU/GuideMaker-v0.3.1.zip

Files (6.3 MB)

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md5:1ffdcf1d4deced3c23532d17374c4449
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Additional details

Related works

Is supplement to
https://github.com/USDA-ARS-GBRU/GuideMaker/tree/v0.3.1 (URL)