Published April 24, 2017
| Version 1.1.0
Software
Open
gringer/bioinfscripts: Chimeric Read Update
Authors/Creators
Description
Updated code for improved processing of chimeric reads. Some useful scripts:
- signal_viewer.r -- display raw signal for a given raw data file (assumes 16-bit integers)
- porejuicer.py -- nanopore read processor; used for extracting fastq files and raw signal from fast5 files
- maf_bcsplit.py -- converts LAST alignments to simplified and normalised CSV format containing start/end locations
- posAggregate.py -- aggregates adjacent and similarly oriented matches in the output format of maf_bcsplit.py
Files
gringer/bioinfscripts-1.1.0.zip
Files
(299.6 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/gringer/bioinfscripts/tree/1.1.0 (URL)