Published September 28, 2021
| Version v2.3.2
Software
Open
fmalmeida/bacannot: fmalmeida/bacannot v2.3.2
Description
The pipeline
bacannot, is a customisable, easy to use, pipeline that uses state-of-the-art software for comprehensively annotating prokaryotic genomes having only Docker and Nextflow as dependencies. It is able to annotate and detect virulence and resistance genes, plasmids, genomic islands, prophages, ICEs, KO, and more.
Release notes- There is a smal fix in the
update_database_image.shso it takes only the first two numbers of release tags. - Changed the pipeline to now accept the resfinder species panel "Other"
- Fixed the Resfinder report to understand when only the pointfinder mutations are empty.
Files
fmalmeida/bacannot-v2.3.2.zip
Files
(11.3 MB)
| Name | Size | Download all |
|---|---|---|
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md5:3836e2d44fe8c47c91ad8768fc4b8593
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11.3 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/fmalmeida/bacannot/tree/v2.3.2 (URL)