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Published September 24, 2021 | Version v2.3.1
Software Open

fmalmeida/bacannot: fmalmeida/bacannot v2.3.1

  • 1. University of Brasilia @compgenunb

Description

The pipeline

bacannot, is a customisable, easy to use, pipeline that uses state-of-the-art software for comprehensively annotating prokaryotic genomes having only Docker and Nextflow as dependencies. It is able to annotate and detect virulence and resistance genes, plasmids, genomic islands, prophages, ICEs, KO, and more.

Release notes Fix in main.nf

Fixed a very small problem that was holding up the execution of flye and unicycler when using the multi-samples workflow with the "samplesheet.yml". The scripts for unicycler and flye under multi-samples workflow was with an "if" statement in the wrong position.

Files

fmalmeida/bacannot-v2.3.1.zip

Files (11.3 MB)

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Additional details

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