Published September 17, 2021 | Version v2
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Data from: Genetic and ecogeographic controls on species cohesion in Australia's most diverse lizard radiation

  • 1. University of Michigan-Ann Arbor
  • 2. California State University, Dominguez Hills
  • 3. Ohio University
  • 4. University of California Berkeley
  • 5. Australian National University
  • 6. South Australia Museum*

Description

Species vary extensively in geographic range size and climatic niche breadth. If range limits are primarily determined by climatic factors, species with broad climatic tolerances and those that track geographically widespread climates should have large ranges. However, large ranges might increase the probability of population fragmentation and adaptive divergence, potentially decoupling climatic niche breadth and range size. Conversely, ecological generalism in widespread species might lead to higher gene flow across climatic transitions, increasing species' cohesion and thus decreasing genetic isolation-by-distance (IBD). Focusing on Australia's iconic Ctenotus lizard radiation, we ask whether species range size scales with climatic niche breadth and the degree of population isolation. To this end, we infer independently evolving operational taxonomic units (OTUs), their geographic and climatic ranges, and the strength of IBD within OTUs based on genome-wide loci from 722 individuals spanning 75 taxa. Large-ranged OTUs were common and had broader climatic niches than small-ranged OTUs; thus, large ranges do not simply result from passive tracking of widespread climatic zones. OTUs with larger ranges and broader climatic niches showed relatively weaker IBD, suggesting that large-ranged species might possess intrinsic attributes that facilitate genetic cohesion across large distances and varied climates. By influencing population divergence and persistence, traits that affect species cohesion may play a central role in large-scale patterns of diversification and species richness.

Notes

The following information is provided:

  1. Sample information;

  2. Filtered and assembled genetic (ddRAD) data;

  3. Climatic and biome data extracted from the localities of sampled individuals or taxon range polygons;

  4. Outputs from phylogenetic, genetic structure, and OTU delimitation analyses;

  5. Outputs and intermediate files generated during the estimation of geographic range size and climatic niche breadth for Australian squamate taxa and Ctenotus OTUs;

  6. Outputs and intermediate files generated during the estimation of genetic isolation-by-distance and expected heterozygosity for Ctenotus OTUs;

Raw read data for the newly sequenced samples were deposited in the Sequence Read Archive and can be retrieved at:

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA755251

Please send questions to ivanprates [at] gmail [dot] com.

Funding provided by: National Science Foundation
Crossref Funder Registry ID: http://dx.doi.org/10.13039/100000001
Award Number: DEB 1754398

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Additional details

Related works

Is derived from
10.5061/dryad.jm63xsjbq (DOI)