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Published September 4, 2021 | Version v0.5.1
Software Open

althonos/pyrodigal: 0.5.1

Authors/Creators

  • 1. EMBL, @zellerlab

Description

Added
  • Additional Gene properties to access the score
Changed
  • Use more efficient PyUnicode macros when reading or creating a string containing a nucleotide or a protein sequence.
  • Release the GIL when creating a bitmap for an str given as input to Pyrodigal.find_genes.
  • Release the GIL when creating the protein sequence returned by Gene.translate.
Fixed
  • Pyrodigal.find_genes and Gene.translate not behaving like Prodigal when handling sequences with unknown nucleotides.

Files

althonos/pyrodigal-v0.5.1.zip

Files (167.0 kB)

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md5:f8c92d858d40dcbf8e74bef28f5de1db
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Additional details

Related works

Is supplement to
https://github.com/althonos/pyrodigal/tree/v0.5.1 (URL)