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Published September 3, 2021 | Version 2.0.0
Software Open

nf-core/mhcquant: nf-core/mhcquant v2.0.0 - Steel Beagle

  • 1. @theislab @schillerlab
  • 2. Boehringer Ingelheim
  • 3. @qbicsoftware
  • 4. Science for Life Laboratory
  • 5. @SciLifeLab | Karolinska Institutet
  • 6. German Human Genome-Phenome Archive
  • 7. QBiC @qbicsoftware

Description

Enhancements
  • DSL1 to DSL2 conversion
  • Different processes based on a unique step in the pipeline
  • Inclusion of one sub-workflow: refine FDR on a predicted subset
  • The process: openms_cometadapter includes commented lines (which could be used as a reference for future module development)
  • MHCquant pipeline runs from workflows/mhcquant.nf instead of the main
  • Template update to nf-core/tools 2.1

Files

nf-core/mhcquant-2.0.0.zip

Files (2.4 MB)

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Additional details

Related works