callahantiff/PheKnowLator: v2.1.1
Authors/Creators
- 1. CU Anschutz Medical Campus
- 2. Università degli Studi di Milano
Description
Website: https://github.com/callahantiff/PheKnowLator/wiki/v2.0.0
Data Access: Google Cloud Storage -- PheKnowLator Bucket
Docker Container: DockerHub Dedicated Project Container
PyPI: pkt-kg 2.1.1
Updated Jupyter Notebooks:
Updated Scripts:
pkt_kg/owlnets.pypkt_kg/utils/kg_utils.py
- For the
owlnets.pyscript, three new hyperparameters were added to provide users with more flexibility in terms of what support, top, and relation ontology objects are included in an OWL-NETS graph. The pruning functions were also improved to make sure that metadata are not getting through (i.e., obsolete classes and XML Schema). - For the
OWLNETS_Example_Application.ipynbJupyter Notebook, new functionality was added to include node and relation definitions. - Added new function to obtain the definitions for all
owl:Classandowl:ObjectPropertyobjects to 'pkt_kg/utils/kg_utils.py`
<br>
Example of New Functionality:
<img width="800" alt="Screen Shot 2021-09-02 at 01 28 24" src="https://user-images.githubusercontent.com/8030363/131801284-cacd5ded-1577-41a6-b66e-eb0b7b157afa.png">
Files
callahantiff/PheKnowLator-v2.1.1.zip
Files
(64.1 MB)
| Name | Size | Download all |
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md5:2915edf7895253331f5b11eb695bdb98
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Additional details
Related works
- Is supplement to
- https://github.com/callahantiff/PheKnowLator/tree/v2.1.1 (URL)