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Published July 1, 2021 | Version v1
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Comparative phylogeography between parasitic sucking lice and their host the Namaqua rock mouse, Micaelamys namaquensis (Rodentia: Muridae)

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Bothma, Johannes C, Matthee, Sonja, Matthee, Conrad A (2021): Comparative phylogeography between parasitic sucking lice and their host the Namaqua rock mouse, Micaelamys namaquensis (Rodentia: Muridae). Zoological Journal of the Linnean Society 192 (3): 1017-1028, DOI: 10.1093/zoolinnean/zlaa122, URL: https://academic.oup.com/zoolinnean/article/192/3/1017/5983169

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urn:lsid:plazi.org:pub:FFF2FFECFFBF034B620BFFBFBA57FFFF
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http://publication.plazi.org/id/FFF2FFECFFBF034B620BFFBFBA57FFFF

Cites
Publication: 10.1101/2020.02.28.969279 (DOI)
Has part
Taxonomic treatment: http://treatment.plazi.org/id/03CB8794FFB9034C6299F979BE56FD31 (URL)
Figure: 10.5281/zenodo.5301349 (DOI)
Figure: 10.5281/zenodo.5301351 (DOI)
Figure: 10.5281/zenodo.5301353 (DOI)
Figure: 10.5281/zenodo.5301355 (DOI)

References

  • Akaike H. 1973. Maximum likelihood identification of Gaussian autoregressive moving average models. Biometrika 60: 255-265.
  • Bell KC, Demboski JR, Cook JA. 2018. Sympatric parasites have similar host-associated, but asynchronous, patterns of diversification. The American Naturalist 192: e106-e119.
  • Bothma JC, Matthee S, Matthee CA. 2020. The evolutionary history of parasitic sucking lice and their rodent hosts: a case of evolutionary co- divergences. Zoologica Scripta 49: 72-85.
  • Burnham KP, Anderson DR. 2004. Multimodel inference: understanding AIC and BIC in model selection. Sociological Methods & Research 33: 261-304.
  • Cannon SM. 2010. Size correlations between sucking lice and their hosts including a test of Harrison's rule. Electronic theses and dissertations no.764, Georgia Southern University, Master of Science in Biology. Available at: https://digitalcommons. georgiasouthern.edu/etd/764 (accessed 30 September 2020).
  • Chimimba CT. 2001. Infraspecific morphometric variation in Aethomys namaquensis (Rodentia: Muridae) from southern Africa. Journal of Zoology 253: 191-210.
  • Clement M, Posada D, Crandall KA. 2000. TCS: a computer program to estimate gene genealogies. Molecular Ecology 9: 1657-1659.
  • Clement M, Snell Q, Walke P, Posada D, Crandall K. 2002. TCS: estimating gene genealogies. 16th International Parallel and Distributed Processing Symposium 2: 184.
  • Conow C, Fielder D, Ovadia Y, Libeskind-Hadas R. 2010. Jane: a new tool for the cophylogeny reconstruction problem. Algorithms for Molecular Biology 5: 16.
  • Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9: 772.
  • Durden LA, Musser GG. 1994. The mammalian hosts of the sucking lice (Anoplura) of the world: a host-parasite list. Bulletin of the Society for Vector Ecology 19: 130-168.
  • Du Toit N, Van Vuuren BJ, Matthee S, Matthee CA. 2013. Biogeography and host- related factors trump parasite life history: limited congruence among the genetic structures of specific ectoparasitic lice and their rodent hosts. Molecular Ecology 22: 5185-5204.
  • Engelbrecht A, Matthee CA, Ueckermann EA, Matthee S. 2014. Evidence of cryptic speciation in mesostigmatid mites from South Africa. Parasitology 141: 1322-1332.
  • Engelbrecht A, Matthee S, Du Toit N, Matthee CA. 2016. Limited dispersal in an ectoparasitic mite, Laelaps giganteus, contributes to significant phylogeographic congruence with the rodent host, Rhabdomys. Molecular Ecology 25: 1006-1021.
  • Excoffier L, Lischer HE. 2010. Arlequin suite v.3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources 10: 564-567.
  • Excoffier L, Smouse PE, Quattro JM. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
  • Fagir DM, Ueckermann EA, Horak IG, Bennett NC, Lutermann H. 2014. The Namaqua rock mouse (Micaelamys namaquensis) as a potential reservoir and host of arthropod vectors of diseases of medical and veterinary importance in South Africa. Parasites & Vectors 7: 366.
  • Fleming PA, Nicolson SW. 2004. Sex differences in space use, body condition and survivorship during the breeding season in the Namaqua rock mouse, Aethomys namaquensis. African Zoology 39: 123-132.
  • Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52: 696-704.
  • Gutierrez-Garcia TA, Vazquez-Dominguez E. 2011. Comparative phylogeography: designing studies while surviving the process. BioScience 61: 857-868.
  • Hughes VL, Randolph SE. 2001. Testosterone depresses innate and acquired resistance to ticks in natural rodent hosts: a force for aggregated distributions of parasites. Journal of Parasitology 87: 49-54.
  • Johnson PT. 1960. The Anoplura of African rodents and insectivores. U.S. Department Agricultural Technology Bulletin 211: 116.
  • Kleynhans KPN. 1969. Descriptions of Hoplopleura aethomydis n. sp. and of the male of Polyplax solivaga (Anoplura: Hoplopleuridae). Onderstepoort Journal of Veterinary Research 36: 299-302.
  • Kumar R, Kumar V. 2018. A review of phylogeography: biotic and abiotic factors. Geology, Ecology, and Landscapes 2: 268-274.
  • Ledger JA. 1980. The arthropod parasites of vertebrates in Africa south of the Sahara. Vol. IV. Phthiraptera (Insecta). Johannesburg: Publications of the South African Institute for Medical Research No. 56. South African Institute for Medical Research.
  • de Leon GPP, Nadler SA. 2010. What we don't recognize can hurt us: a plea for awareness about cryptic species. Journal of Parasitology 96: 453-464.
  • Martin u J, Hypsa V, Stefka J. 2018. Host specificity driving genetic structure and diversity in ectoparasite populations: coevolutionary patterns in Apodemus mice and their lice. Ecology and Evolution 8: 10008-10022.
  • Martinu J, Stefka J, Poosakkannu A, Hypsa V. 2020. Host 'cleansing zone' at secondary contact: a new pattern in hostparasite population genetics. BioRxiv 2020.02.28.969279 doi: https://doi.org/10.1101/2020.02.28.969279.
  • Matthee CA. 2020. The influence of host dispersal on the gene flow and genetic diversity of generalist and specialist ectoparasites. African Zoology 55: 119-126.
  • Matthee CA, Flemming AF. 2002. Population fragmentation in the southern rock agama, Agama atra: more evidence for vicariance in Southern Africa. Molecular Ecology 11: 465-471.
  • Matthee CA, Robinson TJ. 1996. Mitochondrial DNA differentiation among geographical populations of Pronolagus rupestris, Smith's red rock rabbit (Mammalia: Lagomorpha). Heredity 76: 514.
  • Matthee S, McGeoch MA, Krasnov BR. 2010. Parasitespecific variation and the extent of male-biased parasitism; an example with a South African rodent and ectoparasitic arthropods. Parasitology 137: 651-660.
  • Matthee CA, Engelbrecht A, Matthee S. 2018. Comparative phylogeography of parasitic Laelaps mites contribute new insights into the specialist-generalist variation hypothesis (SGVH). BMC Evolutionary Biology 18: 131.
  • Meester J, Davis DH, Coetzee CG. 1964. An interim classification of southern African mammals. South Africa: Zoological Society of Southern Africa. King William's Town, ZSSA: Mimeograph of the Zoological Society of southern Africa and the Council of Scientific and Industrial Research.
  • Morand S, Krasnov BR. 2010. The biogeography of hostparasite interactions. New York: Oxford University Press, 288.
  • Morand S, Hafner MS, Page RD, Reed DL. 2000. Comparative body size relationships in pocket gophers and their chewing lice. Biological Journal of the Linnean Society 70: 239-249.
  • Nadler SA, de Leon GPP. 2011. Integrating molecular and morphological approaches for characterizing parasite cryptic species: implications for parasitology. Parasitology 138: 1688-1709.
  • Paterson HE, Thompson PM. 1953. A key to the Ethiopian species of the genus Polyplax (Anoplura), with descriptions of two new species. Parasitology 43(3-4): 199-204.
  • Perkins SL, Martinsen ES, Falk BG. 2011. Do molecules matter more than morphology? Promises and pitfalls in parasites. Parasitology 138: 1664-1674.
  • Rambaut A, Drummond AJ. 2015. FigTree, v.1.4.3. Available at: http:/tree.bio.ed.ac.uk/software/figtree/.
  • Rivera-Parra JL, Levin II, Johnson KP, Parker PG. 2017. Host sympatry and body size influence parasite straggling rate in a highly connected multihost, multiparasite system. Ecology and Evolution 7: 3724-3731.
  • Roberts A. 1951. The mammals of South Africa. Johannesburg: The Trustees of the Mammals of South Africa Book Fund, 700.
  • Ronquist F, Teslenko M, Van der Mark P, Ayres DL, Darling A, Hohna S, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542.
  • Rozas J, Ferrer-Mata A, Sanchez-DelBarrio JC, Guirao- Rico S, Librado P, Ramos-Onsins SE, Sanchez-Gracia A. 2017. DnaSP 6: DNA sequence polymorphism analysis of large
  • Rozsa L. 1993. Speciation patterns of ectoparasites and 'straggling' lice. International Journal for Parasitology 23: 859-864.
  • Russo IRM, Chimimba CT, Bloomer P. 2010. Bioregion heterogeneity correlates with extensive mitochondrial DNA diversity in the Namaqua rock mouse,Micaelamys namaquensis (Rodentia: Muridae) from southern Africa-evidence for a species complex. BMC Evolutionary Biology 10: 307.
  • Sanchez-Montes S, Guzman-Cornejo C, Ramirez- Corona F, Leon-Paniagua L. 2016. Anoplurans (Insecta: Psocodea: Anoplura) associated with rodents distributed in the neotropical region of Mexico. Revista Mexicana de Biodiversidad 87: 427-435.
  • Skinner JD, Chimimba CT. 2005. The mammals of the southern African sub-region. Cambridge: Cambridge University Press.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
  • Swofford DL. 2002. PAUP*: phylogenetic analysis using parsimony (* and other methods) v.4, b10. Sunderland: Sinauer.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
  • Tobias ZJ, Jorge F, Poulin R. 2017. Life at the beach: comparative phylogeography of a sandhopper and its nematode parasite reveals extreme lack of parasite mtDNA variation. Biological Journal of the Linnean Society 122: 113-132.
  • Van der Mescht L, Matthee S, Matthee CA. 2015. Comparative phylogeography between two generalist flea species reveal a complex interaction between parasite life history and host vicariance: parasite-host association matters. BMC Evolutionary Biology 15: 105.