Published June 4, 2013
| Version v1
Journal article
Restricted
Molecular analysis validates of some informal morphological groups of Pagurus (Fabricius, 1775) (Anomura: Paguridae) from South America
Authors/Creators
Description
Olguín, Nicole, Mantelatto, Fernando Luis (2013): Molecular analysis validates of some informal morphological groups of Pagurus (Fabricius, 1775) (Anomura: Paguridae) from South America. Zootaxa 3666 (4): 436-448, DOI: 10.11646/zootaxa.3666.4.2
Files
Linked records
Additional details
References
- Ahyong, S.T., Andreakis, N. & Taylor, J. (2011) Mitochondrial phylogeny of the deep-sea squat lobsters, Munidopsidae (Galatheoidea). Zoologischer Anzeiger, 250( 4), 367-377. http://dx.doi.org/10.1016/j.jcz.2011.06.005
- Akaike, H. (1974) A new look at the statistical model identification. IEEE Transactions on Automatic Control, 19 (6), 716-723. http://dx.doi.org/10.1109/TAC.1974.1100705
- Anker, A., Ahyong, S.T., Noel, P.Y. & Palmer, A.R. (2006) Morphological phylogeny of alpheid shrimps: Parallel preadaptation and the origin of a key morphological innovation, the snapping claw. Evolution, 60 (12), 2507-2528. http://dx.doi.org/10.1111/j.0014-3820.2006.tb01886.x
- Asakura, A. (2005) A review of the genus Micropagurus (Crustacea Decapoda Anomura Paguridae). Zootaxa, 1090, 1-34.
- Benedict, J.E. (1892) Preliminary descriptions of thirty-seven new species of hermit crabs of the genus Eupagurus in the U. S. National Museum. Proceedings of the United States National Museum, 15, 1-26. http://dx.doi.org/10.5479/si.00963801.15-887.1
- Boschi, E.E., Fischbach, C.E. & Iorio, M.I. (1992) Catalogo de los crustaceos estοmatopodos y decapodos marinos de Argentina. Frente Mari timo, 10 (A), 7-94.
- Bouvier, E.L. (1940) Decapodes marcheurs. Faune de France, Paris, 37, 1-404.
- Camin, J.H. & Sokal, R.R. (1965) A method for deducing branching sequences in phylogeny. Evolution, 19 (3), 311-326. http://dx.doi.org/10.2307/2406441
- Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution, 17 (4), 540-552. http://dx.doi.org/10.1093/oxfordjournals.molbev.a026334
- Colgan, D.J., McLauchlan, A., Wilson, G.D.F., Livingston, S.P., Edgecombe, G.D., Macaranas, J., Cassis, G. & Gray, M.R. (1998) Histone H3 and U2 snRNA DNA sequences and arthropod molecular evolution. Australian Journal of Zoology, 46 (5), 419-437. http://dx.doi.org/10.1071/ZO98048
- Coutiere, H. (1899) Les ''Alpheidae,'' morphologie externe et interne, formes larvaires, bionomie. Annales des Sciences Naturelles, Zoologie, serie 8, 9, 1-560, pl. 1-6.
- Coutiere, H. (1905) Les Alpheidae, The fauna and geography of the Maldive and Laccadive Archipelagoes. J. Stanley Gardiner, U.K., 2 (4), 852-921, pl. 70-87.
- Crandall, K.A. & Fitzpatrick, Jr. J.F. (1996) Crayfish molecular systematics: Using a combination of procedures to estimate phylogeny. Systematic Biology, 45 (1), 1-26. http://dx.doi.org/10.1093/sysbio/45.1.1
- Dana, J.D. (1852) Crustacea I. United States Exploring Expedition during the years 1838, 1839, 1840, 1841, 1842 under the command of Charles Wilkes, U.S.N., 13, 1-685.
- Fabricius, J.C. (1775) Systema entomologiae, sistens insectorum classes, ordines, genera, species, adiectis, synonymis, locis, descriptionibus, observationibus. Officina Libraria Kortii, Flensburgi et Lipsiae, 832 pp.
- Felsenstein, J. (1981) Evolutionary trees from DNA sequences: A maximum likelihood approach. Journal of Molecular Evolution, 17 (6), 368-376. http://dx.doi.org/10.1007/BF01734359
- Felsenstein, J. (1985) Confidence limits on phylogenies: An approaching using the bootstrap. Evolution, 39 (4), 783-791. http://dx.doi.org/10.2307/2408678
- Forest, J. (1955) Crustaces Decapodes, Pagurides. EXpedition οceanographique belge dans les eaux cotieres africaines de l'Atlantique sud (1948-1949): Resultats scientifiques. Institut royal des Sciences naturelles de Belgique, 3(4), 29-147, pl. 1-6.
- Forest, J. & de Saint Laurent, M. (1968) Campagne de la "Calypso" au large des cotes Atlantiques de l'Amerique meridionale du Sud (1961-1962). I. 6. Crustaces Decapodes: Pagurides. Annales de l'Institut Oceanographique de Monaco, 45 (2), 47- 170.
- Garcia-Gomez, J. (1982) The provenzanoi group of hermit crabs (Crustacea, Decapoda, Paguridae) in the Western Atlantic. Part I. Pagurus maclaughlinae, a new species. Bulletin of Marine Science, 32 (3), 647-655.
- Goloboff, P.A., Farris, J.S. & Nixon, K.C. (2008) TNT, a free program for phylogenetic analysis. Cladistics, 24 (5), 774-786. http://dx.doi.org/10.1111/j.1096-0031.2008.00217.x
- Guzman, G. (2004) Isocheles aequimanus (Dana, 1852) (Decapoda, Anomura, Paguroidea): Revalidacion para la carcinofauna chilena. Investigaciones Marinas, 32 (2), 129-132. http://dx.doi.org/10.4067/S0717-71782004000200011
- Haig, J. (1955) The Crustacea Anomura of Chile. Reports of the Lund University Chile Expedition 1948-49. Lunds Universitets Arsskrift N.F. Avd. 2, 51 (12), 1-68.
- Haig, J. (1974) Two new species of Pagurus from deep water off Peru and Chile (Decapoda, Anomura, Paguridae). Crustaceana, 27 (2), 119-130. http://dx.doi.org/10.1163/156854074X00325
- Haig, J. & McLaughlin, P.A. (1991) The identity of Pagurus lepidus (Bouvier) (Decapoda, Anomura, Paguridae) and description of a new Eastern Pacific insular species. Contributions in Science, 425(1), 1-12.
- Hall, T.A. (2005) BioEdit version 7.0.5. North Carolina State University, Department of Microbiology. Available from: http:// www.mbio.ncsu.edu/BioEdit/bioedit.html (Accessed 1 December 2010).
- Harvey, A.W. & McLaughlin, P.A. (1991) Two new species of the provenzanoi group of Pagurus (Decapoda, Anomura, Paguridae) from the eastern Pacific with notes on their ecology. Contributions in Science, 425 (1), 13-22.
- Hayashi, K.I. (2006) Revision of the Pasiphaea alcocki species group (Crustacea, Decapoda, Pasiphaeidae). In: De Forges, R.B. & Justine, J.L. (Eds.), Tropical Deep-Sea Benthos. Memoires du Museum national d'Histoire naturelle, 193 (24), pp. 193-241.
- Herbst, J.F.W. (1791). Versuch einer Naturgeschichte der Krabben und Krebse nebst einer systematischen Beschreibung ihrer verschiedenen Arten. Stralsund, Berlin, 2, 1-226.
- Hultgren, K.M & Duffy, J.E. (2011) Multi-locus phylogeny of sponge-dwelling snapping shrimp (Caridea: Alpheidae: Synalpheus) supports morphology-based species concepts. Journal of Crustacean Biology, 31 (2), 352-360. http://dx.doi.org/10.1651/10-3382.1
- Ingle, R.W. (1985) Northeastern Atlantic and Mediterranean hermit crabs (Crustacea: Anomura: Paguroidea: Paguridae). I. The genus Pagurus Fabricius, 1775. Journal of Natural History, 19, 745-769. http://dx.doi.org/10.1080/00222938500770461
- Lagerberg, T. (1905) Anomura und Brachyura der Schwedischen Su?dpolar-Expedition. Wissenschaftliche Ergebnisse der Schwedischen Su?dpolar-Expedition 1901-1903, Zoologie, Lieferung, 5 (7), 1-39.
- Lanave, C., Preparata, G., Saccone, C. & Serio, G. (1984) A new method for calculating evolutionary substitution rates. Journal of Molecular Evolution, 20 (1), 86-93. http://dx.doi.org/10.1007/BF02101990
- Lavery, S., Chan, T.Y., Tam, Y.K. & Chu, K.H. (2004) Phylogenetic relationships and evolutionary history of the shrimp genus Penaeus s.l. derived from mitochondrial DNA. Molecular Phylogenetics and Evolution, 31 (1), 39-49. http://dx.doi.org/10.1016/j.ympev.2003.07.015
- Leach, W.E. (1815) Malacostraca Podophthalmata Britanniae; or, Descriptions of such British species of the Linnean genus Cancer as have their eyes elevated on footstalks. Sowerby, London, 124 pp., pl. 1-45.
- Lemaitre, R. & Cruz Castano, N. (2004) A new species of Pagurus Fabricius, 1775 from the Pacific coast of Colombia, with a checklist of Eastern Pacific species of the genus. Nauplius, 12 (2), 71-82.
- Lemaitre, R. & Felder, D.L. (2011) A new genus of Paguridae (Crustacea: Decapoda: Anomura) for a new species from the tropical eastern Pacific and Pagurus longimanus Wass, 1963 from the tropical western Atlantic. Zootaxa, 3125, 39-50.
- Lemaitre, R., McLaughlin, P.A. & Garcia-Gomez, J. (1982) The Provenzanoi group of hermit crabs (Crustacea, Decapoda, Paguridae) in the Western Atlantic. Part IV. A review of the group, with notes on variations and abnormalities. Bulletin of Marine Science, 32 (3), 670-701.
- Lemaitre, R. & Watabe, H. (2005) Pagurus ikedai (Crustacea: Anomura: Paguridae), a new hermit crab species of the bernhardus group from Japanese waters. Zootaxa, 819, 1-12.
- Linnaeus, C. (1758) Systema naturae per regna tria naturae, secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis locis. Editio decima, Laurentii Salvii, Holmiae, 824 pp.
- MacDonald, J.D., Pike, R.B. & Williamson, D.I. (1957) Larvae of the British species of Diogenes, Pagurus, Anapagurus and Lithodes (Crustacea, Decapoda). Proceedings of the Zoological Society of London, 128 (2), 209-257. http://dx.doi.org/10.1111/j.1096-3642.1957.tb00265.x
- Macpherson, E. (2007) Species of the genus Munidopsis Whiteaves, 1784 from the Indian and Pacific Oceans and reestablishment of the genus Galacantha A. Milne-Edwards, 1880 (Crustacea, Decapoda, Galatheidae). Zootaxa, 1417, 1- 135.
- Mantelatto, F.L., Pardo, L.M., Pileggi, L.G. & Felder, D.L. (2009) Taxonomic re-examination of the hermit crab species Pagurus forceps and Pagurus comptus (Decapoda: Paguridae) by molecular analysis. Zootaxa, 2133, 20-32.
- Mantelatto, F.L., Robles, R., Biagi, R. & Felder, D.L. (2006) Taxonomic and distributional status based on molecular data for the hermit crab genera Loxopagurus Forest, 1964, and Isocheles Stimpson, 1858 (Decapoda, Anomura, Diogenidae). Zoosystema, 28 (2), 495-506.
- Mantelatto, F.L., Robles, R. & Felder, D.L. (2007) Molecular phylogeny of the Western Atlantic species of the genus Portunus (Crustacea, Brachyura, Portunidae). Zoological Journal of the Linnean Society of London, 150 (1), 211-220. http://dx.doi.org/10.1111/j.1096-3642.2007.00298.x
- Mantelatto, F.L., Robles, R., Schubart, C.D. & Felder, D.L. (2009) Molecular phylogeny of the genus Cronius Stimpson, 1860, with reassignment of C. tumidulus and several American species of Portunus to the genus Achelous De Hann, 1833 (Brachyura: Portunidae). In: Martin, J.W., Crandall, K.A. & Felder, D.L. (Eds.), Crustacean Issues: Decapod Crustacean Phylogenetics. Taylor & Francis/CRC Press, Boca Raton, Florida, pp. 537-551.
- Matzen da Silva, J., Creer, S., dos Santos, A., Costa, A.C., Cunha, M.R., Costa, F.O. & Carvalho, G.R. (2011) Systematic and evolutionary insights derived from mtDNA COI barcode diversity in the Decapoda (Crustacea: Malacostraca). PLoS ONE, 6 (5), e19449. http://dx.doi.org/10.1371/journal.pone.0019449.
- McLaughlin, P.A. (1974) The hermit crabs (Crustacea Decapoda, Paguridea) of northwestern North America. Zoologische Verhandelingen, 130, 1-396, pl. 1.
- McLaughlin, P.A. (1975) On the identity of Pagurus brevidactylus (Stimpson) (Decapoda: Paguridea), with the description of a new species of Pagurus from the Western Atlantic. Bulletin of Marine Science, 25 (3), 359-376.
- McLaughlin, P.A. (1982) The provenzanoi group of hermit crabs (Crustacea, Decapoda, Paguridae) in the Western Atlantic. Part III, Pagurus protuberocarpus, a new species from the southern Caribbean. Bulletin of Marine Science, 32 (3), 664- 669.
- McLaughlin, P.A. & Gore, R.H. (1988) Studies on the provenzanoi and other pagurid groups: I. The larval stages of Pagurus maclaughlinae Garcia Gomez, 1982 (Decapoda: Anomura: Paguridae), reared under laboratory conditions. Journal of Crustacean Biology, 8 (2), 262-282. http://dx.doi.org/10.2307/1548319
- McLaughlin, P.A., Gore, R.H. & Harvey, A.W. (1991a) Studies on the provenzanoi and other pagurid groups: IV. The larval stages of Pagurus vetaultae Harvey and McLaughlin, 1991 (Decapoda: Anomura: Paguridae), reared in the laboratory. Journal of Crustacean Biology, 11 (2), 277-291. http://dx.doi.org/10.1163/193724091x00095
- McLaughlin, P.A., Gore, R.H. & Harvey, A.W. (1991b) Studies on the provenzanoi and other pagurid groups: V. The larval stages of Pagurus arenisazatilis Harvey and McLaughlin, 1991 (Decapoda: Anomura: Paguridae), reared in the laboratory. Journal of Crustacean Biology, 11 (3), 416-431. http://dx.doi.org/10.2307/1548467
- McLaughlin, P.A. & Haig, J. (1993) Two new species of the Pacific component of the provenzanoi group of Pagurus (Decapoda; Anomura; Paguridae) and a key to the regional species. Bulletin of Marine Science, 52(2), 642-668.
- McLaughlin, P.A., Komai, T., Lemaitre, R. & Rahayu, D.L. (2010) Annotated checklist of anomuran decapod crustaceans of the world (exclusive of the Kiwaoidea and families Chirostylidae and Galatheidae of the Galatheoidea). Part I - Lithodoidea, Lomisoidea and Paguroidea. The Raffles Bulletin of Zoology, Supplement, 23, 5-107.
- McLaughlin, P.A. & Lemaitre, R. (2000) Reassignment of Pagurus miyakei Baba, 1986 to Propagurus McLaughlin & de Saint Laurent, 1998 (Decapoda: Anomura: Paguridae) and description of the male. Crustacean Research, 29, 58-64.
- McLaughlin, P.A. & de Saint Laurent, M. (1998) A new genus for four species of hermit crabs formerly assigned to the genus Pagurus Fabricius (Decapoda: Anomura: Paguridae). Proceedings of the Biological Society of Washington, 111 (1), 158- 187.
- Melo, G.A.S. (1999) Manual de Identificac?a o dos Crustacea Decapoda do Litoral Brasileiro: Anomura, Thalassinidea, Palinuridea, Astacidea. Editorial Ple?iade, sao Paulo, Brasil, 551 pp.
- Milne-Edwards, A. & Bouvier, E.L. (1892) Observations preliminaires sur les paguriens recueillis par les eXpeditions du Travailleur et du Talisman. Annales des Sciences Naturelles, 7 (13), 185-226.
- Milne Edwards, H. (1836) Observations zoologiques sur les Pagures et description d'un nouveau genre de la tribu des Paguriens. Annales des Sciences Naturelles, Zoologie, Paris, 2 (6), 257-288.
- Milne Edwards, H. (1848) Note sur quelques nouvelles especes du genre Pagure. Annales des Sciences Naturelles, Zoologie, Paris, 3 (10), 59-64.
- Nicolet, H. (1849) Historia fisica y pοlitica de Chile. In: Gay, C. (Ed.), Zoologia, 3, 1-547.
- Nucci, P.R. & Melo, G.A.S. (2003) A new species of Pagurus (Decapoda, Anomura, Paguridae) from Brazil. Journal of the Marine Biological Association of the United Kingdom, 83 (2), 351-353. http://dx.doi.org/10.1017/S0025315403007185h
- Nucci, P.R. & Melo, G.A.S. (2007) Hermit crabs from Brazil. Family Paguridae (Crustacea: Decapoda: Paguroidea): Genus Pagurus. Zootaxa, 1406, 47-59.
- Posada, D. & Buckley, T. (2004) Model selection and model averaging in phylogenetics: Advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology, 53 (5), 793-808. http://dx.doi.org/10.1080/10635150490522304
- Posada, D. & Crandall, K.A. (1998) MODELTEST: Testing the model of DNA substitution. Bioinformatics, 14 (9), 817-818. http://dx.doi.org/10.1093/bioinformatics/14.9.817
- Rοdriguez, R., Oliver, J.L, Μarin, A. & Medina, J.R. (1990) The general stochastic model of nucleotide substitution. Journal of Theoretical Biology, 142 (42), 485-501. http://dx.doi.org/10.1016/S0022-5193(05)80104-3
- Saitou, N. & Nei, M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4 (4), 406-425.
- Sandberg, L. & McLaughlin, P.A. (1993) Reexamination of Pagurus minutus Hess, 1865, and Pagurus filholi (de Man, 1887) (Crustacea: Anomura: Paguridae). Zoologische Mededelingen, 67 (13), 197-206.
- Say, T. (1817) An account of the Crustacea of the United States. Journal of the Academy of Natural Sciences of Philadelphia, 1 (1), 155-169.
- Scelzo, M.A., Fantucci, M.Z. & Mantelatto, F.L. (2010) Spermatophore and gonopore morphology of the Southwestern- Atlantic hermit crab Pagurus exilis (Benedict, 1892) (Anomura, Paguridae). Zoological Studies, 49 (3), 421-433.
- Schubart, C.D., Neigel, J.E. & Felder, D.L. (2000a) Molecular phylogeny of mud crabs (Brachyura: Panopeidae) from the northwestern Atlantic and the role of morphological stasis and convergence. Marine Biology, 137 (1), 11-18. http://dx.doi.org/10.1007/s002270000325
- Schubart, CD., Neigel, J.E. & Felder, D.L. (2000b) Use of the mitochondrial 16S rRNA gene for phylogenetic and population studies of Crustacea. Crustacean Issues, 12 (1), 817-830.
- Snyder-Conn, E. (1980) Artropoda Crustacea Paguroidea and Coenobitoidea (hermit crabs). In: Brusca, R.C. (Ed.), Common Intertidal Invertebrates of the Gulf of California. University of Arizona Press, Tucson, pp. 275-285.
- Stamatakis, A. (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22 (21), 2688-2690. http://dx.doi.org/10.1093/bioinformatics/btl446
- Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web-Servers. Systematic Biology, 57 (5), 758-771. http://dx.doi.org/10.1080/10635150802429642
- Stimpson, W. (1859) Notes on North American Crustacea. Annals of the Lyceum of Natural History in New York, 1 (7), 49-93.
- Talavera, G. & Castresana, J. (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology, 56 (4), 564-577. http://dx.doi.org/10.1080/10635150701472164
- Tamura, K., Nei, M. & Kumar, S. (2004) Prospects for inferring very large phylogenies by using the neighbor-joining method. Proceedings of the National Academy of Sciences (USA), 101 (30), 11030-11035. http://dx.doi.org/10.1073/pnas.0404206101
- Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution, 28 (10), 2731-2739. http://dx.doi.org/10.1093/molbev/msr121
- Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994) Clustal W, improving, position the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Research, 22 (22), 4673-4680. http://dx.doi.org/10.1093/nar/22.22.4673
- Tudge, C. (1999) Spermatophore morphology in the hermit crab families Paguridae and Parapaguridae (Paguroidea, Anomura, Decapoda). Invertebrate Reproduction and Development, 35 (3), 203-214. http://dx.doi.org/10.1080/07924259.1999.9652386
- White, A. (1847) Descriptions of some new species of Crustacea in the collection of the British Museum. Proceedings of the Zoological Society of London, 1847, 118-126.