Galaxy Training Network
Published August 12, 2016 | Version v1
Dataset Open

Proteomic analysis of silenced cathepsin B expression suggests non-proteolytic cathepsin B functionality.

Creators

  • 1. Institute of Molecular Medicine and Cell Research, University of Freiburg, D-79104 Freiburg, Germany; Faculty of Biology, University of Freiburg, D-79104 Freiburg, Germany.
  • 2. Institute of Molecular Medicine and Cell Research, University of Freiburg, D-79104 Freiburg, Germany; BIOSS Centre for Biological Signaling Studies, University of Freiburg, Freiburg, Germany.

Description

A list of human protein uniprot IDs. The proteins were identified by LC-MS/MS in the cellular supernatant of MDA-MB-231 cells, originally published in:

F.C. Sigloch, J.D. Knopf, J. Weißer, A. Gomez-Auli, M.L. Biniossek, A. Petrera, et al., Proteomic analysis of silenced cathepsin B expression suggests non-proteolytic cathepsin B functionality, Biochim. Biophys. Acta - Mol. Cell Res. 1863 (2016) 2700–2709. doi:10.1016/j.bbamcr.2016.08.005. https://www.ncbi.nlm.nih.gov/pubmed/27526672

Notes

This dataset can be used as a test dataset for the GTN GalaxyP workflow on secretome prediction (https://github.com/galaxyproject/training-material/tree/master/Proteomics/workflows/secretome_prediction).

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Additional details

Related works

Is supplement to
10.1016/j.bbamcr.2016.08.005 (DOI)