Published July 22, 2021
| Version 1.0
Dataset
Open
AMFinder training dataset
Authors/Creators
- 1. Sainsbury Laboratory, University of Cambridge
- 2. Department of Applied Mathematics and Theoretical Physics, University of Cambridge
- 3. Department of Biochemistry, University of Cambridge
- 4. Department of Plant Sciences, University of Cambridge
Description
Soil fungi establish mutualistic interactions with the roots of most vascular land plants. Arbuscular mycorrhizal (AM) fungi are among the most extensively characterised mycobionts to date.
The software AMFinder allows for automatic computer vision-based identification and quantification of AM fungal colonisation and intraradical hyphal structures on ink-stained root images using convolutional neural networks.
This dataset contains ink-stained root images used for AMFinder training.
Files
CNN1_Background_1.jpg
Files
(6.1 GB)
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Additional details
Related works
- Is supplement to
- Preprint: 10.1101/2021.03.05.434067 (DOI)