Published July 8, 2021
| Version v0.9.9
Software
Open
peterjc/thapbi-pict: THAPBI PICT v0.9.9
Authors/Creators
- 1. The James Hutton Institute
- 2. University of Strathclyde
- 3. University of St Andrews
Description
Released on PyPI on 2021-07-08:
https://pypi.org/project/thapbi-pict/0.9.9/
Dropped the SWARM based classifiers. This allowed optimising the pipeline to run the classifier on a non-redundant FASTA file containing all the observed sequences - with associated changes to the summary report code etc to match.
Also optimised the memory footprint of the load-tax command to more than halve the peak RAM requirement in building our default database.
Files
peterjc/thapbi-pict-v0.9.9.zip
Files
(4.1 MB)
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md5:c71fcb4dbf10f422f1bb986e89157af8
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Additional details
Related works
- Is supplement to
- https://github.com/peterjc/thapbi-pict/tree/v0.9.9 (URL)