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Published July 4, 2021 | Version 0.0.9
Software Open

neurostuff/NiMARE: 0.0.9

Authors/Creators

  • 1. Florida International University
  • 2. University of Texas at Austin
  • 3. Big Data Institute, University of Oxford
  • 4. Neurology and Neurosurgery, McGill University
  • 5. Neuroscience Program, University of Iowa
  • 6. Department of Psychology, Stanford University
  • 7. Department of Neuroscience and Biomedical Engineering, Aalto University
  • 8. National Institute on Aging
  • 9. National Institute of Mental Health
  • 10. Auburn University
  • 11. Montreal Neurological Institute, McGill University
  • 12. MIT
  • 13. Max Planck Institute for Human Cognitive and Brain Sciences

Description

Release Notes

This release primarily improves testing and documentation, but there are a few new features as well. The new features include (1) a new "merge" method for Datasets, to combine two Datasets into a new one, (2) a new ImageTransformer class for generating new images from existing ones of different types, (3) a new "inspect" method for Correctors, to make it easier for users to see what kinds of multiple comparisons correction methods are available for a Corrector type and a specific MetaResult.

Special thanks to @alexenge for the new ALE subtraction and conjunction analysis example and to @JulioAPeraza for enhancing NiMARE's docstrings with "versionadded" and "versionchanged" directives!

Changes
  • [TST, REF] Address pandas SettingWithCopyWarnings (#534) @tsalo
  • [ENH] Accept multiple annotations files in Neurosynth converter (#531) @tsalo
  • [ENH] Add Corrector.inspect class method (#530) @tsalo
  • [TST] Cover cases where some studies are missing coordinates (#527) @tsalo
  • [ENH] Add drop_invalid option to Dataset.get() and Estimator.fit() (#526) @tsalo
  • [ENH] Support lists of targets in ImageTransformer (#518) @tsalo
  • [DOC] Add versionadded and versionchanged directives to docstrings (#501) @JulioAPeraza
  • [DOC] Add example for ALE subtraction and conjunction analysis (#519) @alexenge
  • [ENH] Add merge method to Dataset class (#517) @tsalo
  • [ENH] Add ImageTransformer class (#513) @tsalo
  • [ENH] Add overwrite option to transform_images (#509) @tsalo

Files

neurostuff/NiMARE-0.0.9.zip

Files (4.6 MB)

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Additional details

Related works

Is supplement to
https://github.com/neurostuff/NiMARE/tree/0.0.9 (URL)