Published June 1, 2021 | Version v1
Dataset Open

Data set for "Rapid suppression and sustained activation of distinct cortical regions for a delayed sensory-triggered motor response"

Description

Data set for: Esmaeili V, Tamura K, Muscinelli SP, Modirshanechi A, Boscaglia M, Lee AB, Oryshchuk A, Foustoukos G, Liu Y, Crochet S, Gerstner W, Petersen CCH (2021) Rapid suppression and sustained activation of distinct cortical regions for a delayed sensory-triggered motor response. Neuron 109, doi 10.1016/j.neuron.2021.05.005

There are 2 files in this upload:

1. The file named "2021_Esmaeili_Tamura_Neuron.pdf" is the Open Access pdf of the online publication in Neuron.

2. The file named "Esmaeili_data_code.zip" (~55 GB) is a zipped version of a folder "Esmaeili_data_code" (~63 GB), which contains the data analysed in the study along with the Matlab codes used to generate the published figures. To access the data and codes, first unzip the file. The subfolder “Electrophysiology” contains main codes, data and subfunctions to produce figure panels related to silicon probe recordings. The subfolder “Imaging” contains main codes, data and subfunctions to produce figure panels related to wide-field calcium imaging. Each of these subfolders contains a README.txt file with detailed descriptions of files and required toolboxes to run the codes.

When running the code, you need to set the Matlab file path to be "Esmaeili_data_code". In addition, you should add the folder "Esmaeili_data_code" with subfolders to the Matlab path. Some parts of the code rely upon previous results, and need to be executed sequentially in the order of the figure panels in the journal publication.

Files

2021_Esmaeili_Tamura_Neuron.pdf

Files (54.6 GB)

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Additional details

Related works

Is cited by
Journal article: 10.1016/j.neuron.2021.05.005 (DOI)

Funding

Swiss National Science Foundation
Synergistic Approach to Capturing and Exploiting Microscopy Images CRSII5_177237
European Commission
SENSORIMOTOR - Synaptic Mechanisms of Cortical Sensorimotor Integration 293660
Swiss National Science Foundation
Synaptic Plasticity in System Models 200020_165538
European Commission
BRONC - Behavioral demand-driven dynamic reorganisation of cortical networks revealed by simultaneous wide-field optical imaging and optogenetic stimulation mapping in task-performing mice 798617
European Commission
EPFL Fellows - Experienced Researchers Incoming Fellowship Programme at the Ecole Polytechnique Fédérale de Lausanne 665667
Swiss National Science Foundation
Synaptic Mechanisms of Sensory Perception and Associative Learning 310030B_166595
Swiss National Science Foundation
Neural circuits for goal-directed sensorimotor transformation 31003A_182010

References

  • Esmaeili V, Tamura K, Muscinelli SP, Modirshanechi A, Boscaglia M, Lee AB, Oryshchuk A, Foustoukos G, Liu Y, Crochet S, Gerstner W, Petersen CCH (2021) Rapid suppression and sustained activation of distinct cortical regions for a delayed sensory-triggered motor response. Neuron 109, doi 10.1016/j.neuron.2021.05.005