Detection of Neoplasms by Metagenomic Sequencing of Cerebrospinal Fluid
Creators
- Gu, Wei
- Rauschecker, Andreas
- Hsu, Elaine
- Zorn, Kelsey
- Sucu, Yasemin
- Federman, Scot
- Gopez, Allan
- Arevalo, Shaun
- Sample, Hannah
- Talevich, Eric
- Nguyen, Eric
- Gottschall, Marc
- Gold, Carl
- Cree, Bruce
- Douglas, Vanja
- Richie, Megan
- Shah, Maulik
- Josephson, Andrew
- Gelfand, Jeffrey
- Miller, Steve
- Wang, Linlin
- Tihan, Tarik
- DeRisi, Joseph
- Chiu, Charles
- Wilson, Michael
Description
Detection of Neoplasms by Metagenomic Sequencing of Cerebrospinal Fluid
Wei Gu1,2*, Andreas M. Rauschecker3, Elaine Hsu1, Kelsey C. Zorn4, Yasemin Sucu1, Scot Federman1, Allan Gopez1, Shaun Arevalo1, Hannah A. Sample4, Eric Talevich5, Eric D. Nguyen1, Marc Gottschall1, Carl A. Gold6, Bruce A.C. Cree7, Vanja Douglas7, Megan B. Richie7, Maulik P. Shah7, S. Andrew Josephson7, Jeffrey M. Gelfand7, Steve Miller1, Linlin Wang1, Tarik Tihan8, Joseph L. DeRisi4,9, Charles Y. Chiu10,11, Michael R. Wilson7*
1Department of Laboratory Medicine, University of California San Francisco, CA 94107, USA
2Department of Pathology, Stanford University, CA 94305, USA
3Department of Radiology and Biomedical Imaging, University of California San Francisco, CA 94107, USA
4Department of Biochemistry and Biophysics, University of California San Francisco, CA 94107, USA
5DNANexus, Mountain View, CA 94040, USA
6Department of Neurology, Stanford University, CA 94305, USA
7Weill Institute for Neurosciences, Department of Neurology, University of California San Francisco, CA 94107, USA
8Department of Pathology, University of California San Francisco, CA 94107, USA
9Chan Zuckerberg Biohub, San Francisco, CA 94107, USA
10UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA 91407, USA
11Department of Medicine, Division of Infectious Diseases, University of California San Francisco, CA 94107, USA
* Corresponding authors: Michael Wilson Michael.Wilson@ucsf.edu, Wei Gu weigu@stanford.edu
Files
CSF1-all.pdf
Files
(147.6 MB)
Name | Size | Download all |
---|---|---|
md5:89fc6f78a843b9972760490ba27f0d8b
|
258.7 kB | Preview Download |
md5:4259c846fad18cf3e24680d14ad50a1c
|
1.9 MB | Download |
md5:aa7e5d21bf5bea5081bb303b995a9cc6
|
283.8 kB | Download |
md5:e7f060424bcbd029e222ce962e1150e3
|
254.0 kB | Preview Download |
md5:ca003ea0858004b9afd28f0685f7148e
|
1.8 MB | Download |
md5:02ce16fa14e449bca3f8981a17837756
|
285.6 kB | Download |
md5:487410d84a7fad195ae47951fcc3c2d3
|
259.5 kB | Preview Download |
md5:1ac59601b6de208a27c1ef605ca9bb86
|
1.8 MB | Download |
md5:e43075786605caf2b1ee5a7cf088b931
|
285.6 kB | Download |
md5:13ca19094d90bc0d62a7e20822981ca3
|
257.7 kB | Preview Download |
md5:459a843de62b84650f8edc26c310fb67
|
1.8 MB | Download |
md5:2c88f73ccfa5c8c4e9d361e9080b222a
|
282.8 kB | Download |
md5:71e0aef2483d912e9328da4f73fb1e1b
|
259.5 kB | Preview Download |
md5:33a91a8e3ca6e606a8f25723d6ce4985
|
1.8 MB | Download |
md5:8ad2132668366993955d8aa446e2d0e1
|
283.1 kB | Download |
md5:6b6790b3e3760b5616007fd70b0f026b
|
254.8 kB | Preview Download |
md5:5afe26878452667d98126234e3e89cff
|
1.8 MB | Download |
md5:7a32a529d7d6a725211ac8f44ce70e7e
|
283.6 kB | Download |
md5:752372fdc36d4d1c23c887a35aaa81e8
|
253.6 kB | Preview Download |
md5:9590d3a87e16f006a574526107e89c1e
|
1.8 MB | Download |
md5:ed662eaf671eb7853170fff84bafdc0a
|
287.1 kB | Download |
md5:97a20b51fdaf0cba2150ab2a7fe5e419
|
258.9 kB | Preview Download |
md5:7ac434d001c17d407a68fcc8afaa46f8
|
1.9 MB | Download |
md5:d299e2e1dc12d641bacff2a76a721218
|
282.6 kB | Download |
md5:885df65d41973ce3ab8cc07dffd7954f
|
258.8 kB | Preview Download |
md5:8bea385436ef01e5e8f497aeb627fa24
|
1.8 MB | Download |
md5:89caaccaaa2167706de7d0baf75879b5
|
282.4 kB | Download |
md5:890f97b94c9ce3358dc3606045c73027
|
260.3 kB | Preview Download |
md5:94a5308a20ffd3897c945971d2e86110
|
1.9 MB | Download |
md5:b8e428905a94d0cabf29c292f861a5a3
|
281.2 kB | Download |
md5:018d61b14cd4c6cb139912e7aa524445
|
258.7 kB | Preview Download |
md5:711f0bfc89356f2ec44096ff31e16f25
|
1.8 MB | Download |
md5:cd83233067c81fb3f0448b018833abba
|
283.4 kB | Download |
md5:e7f8525d19cad04b6471bf9c2c0e7fee
|
257.2 kB | Preview Download |
md5:fee3b9c445ac2a050701398e80e13ee9
|
1.8 MB | Download |
md5:34f503c7d9d020856fe7b4c54e43552e
|
279.9 kB | Download |
md5:4148a428bffc0b287e6a51f970ffdc18
|
257.8 kB | Preview Download |
md5:6cd6da032494297ecd1e99143e467b33
|
1.9 MB | Download |
md5:5aee93c0982f298786ee7bcdd37f9063
|
282.9 kB | Download |
md5:ba38fb33899ed1186b4033b7a15ca35f
|
259.3 kB | Preview Download |
md5:9a468a2a21e839c9c7c65e2e103b6105
|
1.8 MB | Download |
md5:2646310e2ca428d714b014e9bac9ed9d
|
282.3 kB | Download |
md5:d472b4801e980b79f223ea59d9b1eae7
|
259.5 kB | Preview Download |
md5:ac797bb290f849f2042b1ee04030ec27
|
1.8 MB | Download |
md5:0f6943c83ddd6737e5a3f212d078c2d8
|
283.5 kB | Download |
md5:cfe280481f7332002f3615546bfd8c05
|
1.4 MB | Download |
md5:cfe280481f7332002f3615546bfd8c05
|
1.4 MB | Download |
md5:590e27c8736b48716c01ff624133dbb8
|
262.2 kB | Preview Download |
md5:aa71a39ba1a28db6ecf19cf689fa3341
|
1.9 MB | Download |
md5:dc4f315e8a9ac655deb25c78918f1470
|
280.0 kB | Download |
md5:64ac44acf8f8be59329d8472162c6a41
|
258.4 kB | Preview Download |
md5:31b3d4234111adc1d0c8b551aeff7dac
|
1.9 MB | Download |
md5:96077eaff8f54ab7726b7ac6a2994dc6
|
281.8 kB | Download |
md5:ce00b5614747ad024e0bba51fda4f1e3
|
262.4 kB | Preview Download |
md5:71715042cd73acb606b767c9b603df1c
|
1.9 MB | Download |
md5:e5c4409e254f2200f2905eb29771f673
|
280.1 kB | Download |
md5:3031db1e4946ef84f7ab449540eac01c
|
258.7 kB | Preview Download |
md5:abd8ce5336896da951d8195510c7ccda
|
1.8 MB | Download |
md5:5ec2faf81b804343c85e45007777f187
|
283.4 kB | Download |
md5:f6d2bef38840566768a26801428f0c6a
|
259.3 kB | Preview Download |
md5:637c453f6b4cffee8d1761cbcacea707
|
1.8 MB | Download |
md5:5a64c09127a42e33228979bfd05f7b8a
|
283.3 kB | Download |
md5:5edabb756511bf7b570c41f5a1be73af
|
259.7 kB | Preview Download |
md5:ba3c0faa4c0396c652c432144c68f3dd
|
1.8 MB | Download |
md5:7e1f6ee3df8dca7b20653964d657178d
|
282.0 kB | Download |
md5:a77fa9a67fb1e42f13f9874ac502b4ad
|
259.6 kB | Preview Download |
md5:95cb8135e8bc29db5221ff301e8d4258
|
1.8 MB | Download |
md5:13fbc7a3df10d9170abc234d52b65141
|
282.9 kB | Download |
md5:4046db2ba9cc7e1d3b4ec68dc76beb31
|
259.2 kB | Preview Download |
md5:0740720d18cd620c9c91662818efa04b
|
1.8 MB | Download |
md5:91c549f4066b7901524ccb3836e90256
|
281.9 kB | Download |
md5:d0de9cdd70ca0bad5039c6056e1b25ce
|
258.8 kB | Preview Download |
md5:3f20f095b893f8b1dd68509e38304856
|
1.8 MB | Download |
md5:490ae21cc24d59769d129705f8661ef0
|
288.8 kB | Download |
md5:b4473e30089d211a67b2135978ff77b2
|
262.0 kB | Preview Download |
md5:82ebabdd656bf35d4a528886521b105f
|
1.9 MB | Download |
md5:53342835934f452a7223df079c72d59e
|
280.8 kB | Download |
md5:f880137084c80884053005d71930cede
|
263.4 kB | Preview Download |
md5:e53e6d086bc6c4b6b62be3be124f58e7
|
1.9 MB | Download |
md5:5b38a2336771951ed847ff02df7c920f
|
279.9 kB | Download |
md5:8aaea448efe7964c4e77f1362011000d
|
263.4 kB | Preview Download |
md5:90b6309fba5a4e236a5d2c876c20de2d
|
1.9 MB | Download |
md5:89467356dd221370d609680cfe134b39
|
279.9 kB | Download |
md5:ad73e18aea98a5d66af9aff7e06ed88e
|
259.4 kB | Preview Download |
md5:a2176c217e6f37f4695f8cc3e3d2f557
|
1.9 MB | Download |
md5:9e33a153a1373463abeb1e632cff7a72
|
281.5 kB | Download |
md5:7d316fde64419061df2f7a1d3cfe8ea4
|
263.4 kB | Preview Download |
md5:16d152525550bc62450b85c2b01794cf
|
1.9 MB | Download |
md5:c5e6fe8786bed5b9d86af5515ab1abdd
|
279.9 kB | Download |
md5:2ab431f1be796a893bf0b602d129d2cb
|
262.4 kB | Preview Download |
md5:7f9e65fae3932da235cd89639edb406a
|
1.9 MB | Download |
md5:f51e26e64c22c7e1fab68fe503b99c68
|
279.9 kB | Download |
md5:6ae127c14d3af5ff2fd7e106af5e42e2
|
260.6 kB | Preview Download |
md5:2770574072d1502e921c2b32061c48cb
|
1.9 MB | Download |
md5:af651f7186d55d79ac9d96c81b86e91e
|
280.3 kB | Download |
md5:08a00d338a6008da535e36d34cfb8fce
|
261.8 kB | Preview Download |
md5:1b2f1c52ceca039d0073c3939bdf0278
|
1.9 MB | Download |
md5:71a0b36903b11e44445d190018fb3bde
|
280.1 kB | Download |
md5:c31b112a407c15352e22602d35991ccd
|
263.3 kB | Preview Download |
md5:9594576cf1fc0a26e8a41384a2b1fe6b
|
1.9 MB | Download |
md5:08571e6c594ec2e1c00c5d1a32622804
|
279.9 kB | Download |
md5:7ffb8f0b1a2d66ef50c9164184fe7fbd
|
264.5 kB | Preview Download |
md5:7769e67f578cd92aa8ead7ffa9cfecb8
|
1.9 MB | Download |
md5:de579d65fe768bc37c69eb46212d3f64
|
280.0 kB | Download |
md5:734d7d87a8a34cc24d059dcba789033d
|
260.2 kB | Preview Download |
md5:0c791faeb91e26141f639a57fedbb5d9
|
1.9 MB | Download |
md5:c5b612ab2545a2f14392abd39163c57a
|
281.3 kB | Download |
md5:bbe3ab93bb573261f98ad02751393849
|
258.2 kB | Preview Download |
md5:8238cd4de110c27b97e272b1ba026df4
|
1.8 MB | Download |
md5:e10a22b0a2e843eecf98c333b84d6517
|
282.6 kB | Download |
md5:97823ed39df12b9c5d8587132659bd84
|
256.0 kB | Preview Download |
md5:3133900dc7745122906acde69b088a23
|
1.8 MB | Download |
md5:08fc7816e54e2e8796127b261dd7fd24
|
288.0 kB | Download |
md5:2198ab691e072a25a5289cb12b421cf8
|
256.2 kB | Preview Download |
md5:0b0fb495397fe43fee8c1565c541f248
|
1.8 MB | Download |
md5:f6ffc50573985283e258a9ecb9cded13
|
283.5 kB | Download |
md5:47c6387f759ac4160ca39af305d4fc32
|
257.7 kB | Preview Download |
md5:da9922311c31e683d792155eaf034e74
|
1.8 MB | Download |
md5:27ff0ba67b53bbbd4f2a13c2de9dab20
|
295.4 kB | Download |
md5:584cf010c44de461573419fc7d61cf8f
|
256.3 kB | Preview Download |
md5:7d93de1b26fc57a44fa4efb114915120
|
1.8 MB | Download |
md5:2ebc95532b6f8b33923af6d610a65f28
|
285.3 kB | Download |
md5:cfe280481f7332002f3615546bfd8c05
|
1.4 MB | Download |
md5:668c011636efd5ca1cfed9c3e4e21ec4
|
259.1 kB | Preview Download |
md5:6bb3b04c2f82463ad221bfd71ace27d4
|
1.8 MB | Download |
md5:90fd64800c67f20a8a812aeadfcfd40a
|
285.6 kB | Download |
md5:9f7fc689c18d4dc8199dd041771d8e16
|
258.6 kB | Preview Download |
md5:425ef54a77fb79f950bc9849906d1370
|
1.8 MB | Download |
md5:e591fc13032c381b19cffab0aa8ba051
|
284.7 kB | Download |
md5:40a85adf1808946965664767600413ad
|
257.2 kB | Preview Download |
md5:09eb4f478c80d201d7b4d1f75a800dd1
|
1.8 MB | Download |
md5:01bf77816db4e5fe627a8582a123d30a
|
286.0 kB | Download |
md5:90b35c91d733afedbfc342419d0d8ba6
|
257.9 kB | Preview Download |
md5:9101bccb57f289bbf6b6c42eca4b5479
|
1.8 MB | Download |
md5:44cdbee7af879f9143ad6255124d4913
|
283.7 kB | Download |
md5:c648e153104a6d72a9ddd08b064d507c
|
257.3 kB | Preview Download |
md5:b5c74ecf3338a1dde631461c1799be1a
|
1.8 MB | Download |
md5:72cc6f53b5d4b9874c13cfc4a8e76edf
|
283.2 kB | Download |
md5:37fe4f6ed03eb667ebfd835500b12dc8
|
258.1 kB | Preview Download |
md5:3d9e2eecf4a71091644934a75ee5617f
|
1.8 MB | Download |
md5:aadb1ffdb6444f493d59f61671e835db
|
283.2 kB | Download |
md5:180a60a058931b12de6b6c46c6fc93b7
|
258.0 kB | Preview Download |
md5:babc3cb2e51611d6af7a8226dafcdca8
|
1.8 MB | Download |
md5:2d423f78e0a2f45dfae60523f1a47cad
|
283.7 kB | Download |
md5:2d927d87400d26bb5455805e2f6d2f75
|
258.8 kB | Preview Download |
md5:d6590383f37022eb43963c134a7e9574
|
1.8 MB | Download |
md5:671d086224f5f62daaac56c2bace2630
|
285.6 kB | Download |
md5:247c0ad88aac055a4ba6b4656552fc4d
|
259.5 kB | Preview Download |
md5:b2eb5944369831ac3832fb664b5e1987
|
1.9 MB | Download |
md5:41bbf34d933a99cfa555f71a431cf7a5
|
281.8 kB | Download |
md5:304c9e5597b7678fd00236f1f91f043d
|
258.4 kB | Preview Download |
md5:1eb0fcb6c1700d483b9796719ef34c25
|
1.8 MB | Download |
md5:38c299d0e05c33fc20f1c5e853c3431c
|
284.0 kB | Download |
md5:6846af581099fc8217283243caac802c
|
257.7 kB | Preview Download |
md5:4aa1852c4a18d5c7fc7df48e60676c56
|
1.8 MB | Download |
md5:cb84d9c35f6cd33e13fa897440e10ef4
|
284.2 kB | Download |
md5:d826e7abfb27e2c27da43318771895a5
|
258.3 kB | Preview Download |
md5:9811c879ae9511971544bdedb84017da
|
1.9 MB | Download |
md5:a3a48537ade18a69a07a6e64283dbe76
|
282.6 kB | Download |
md5:10f4a13257dc1038228535b25ed9e536
|
253.8 kB | Preview Download |
md5:bc50eaf0f9b0361718de32d414e0f544
|
1.8 MB | Download |
md5:e6c3b5d96bdcb19455b4d44ff79e85da
|
284.2 kB | Download |
md5:8b6cdbd0de7cba918c9a50ea7993cf7c
|
255.5 kB | Preview Download |
md5:7bbc601377286d4a02c75e8dc438d174
|
1.8 MB | Download |
md5:a12450622c22722c3d3263c19b41cb68
|
286.1 kB | Download |
md5:71f480572e11e0fe33872500725885af
|
258.5 kB | Preview Download |
md5:1d3c25d6e9ffd8279cc6e90a0b5284e1
|
254.5 kB | Preview Download |
md5:a26e578446d7aaabc6977ac8c5043c44
|
1.8 MB | Download |
md5:4080a942e4011bc839b609d6084f130e
|
287.7 kB | Download |
md5:e0c89c154b29e380d4044fb9b0837d84
|
259.0 kB | Preview Download |
md5:97feccf6ece7d6c4b1980b7c23715766
|
1.8 MB | Download |
md5:72bfd51e85910ae45bd898ba4a225d7a
|
287.3 kB | Download |
md5:18043c3ecebed9fa395cffa23ca8e219
|
255.9 kB | Preview Download |
md5:2d1d942f94f5eaacd4b6d75d3a153dda
|
1.8 MB | Download |
md5:284cf3038314beea748ee747ab37a6b1
|
292.0 kB | Download |
md5:b01f3d3dd99618c50929dffc5b2078c4
|
260.5 kB | Preview Download |
md5:7009b827e8f6aaeb132d093f7bc838ff
|
1.9 MB | Download |
md5:f608b871f6f29b072e7f0fcf08181547
|
282.8 kB | Download |
md5:b6294edfa888ef288e10a5ef0ad675b5
|
258.3 kB | Preview Download |
md5:5cb2dcb2572af69fc475d95f04287255
|
1.8 MB | Download |
md5:45863d80927aae7a28829a8815b6b80e
|
284.6 kB | Download |
md5:944f54088c9915dc13c1db5cf69b8e00
|
258.9 kB | Preview Download |
md5:57246b44edd6e1aba63b9256a706cacb
|
1.9 MB | Download |
md5:5d5c8d31bd06eb3a4316e955998da4cc
|
282.9 kB | Download |