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Published March 29, 2021 | Version 1.1.0
Software Open

nf-core/scrnaseq: nf-core/scrnaseq version 1.1.0 "Olive Mercury Corgi"

Authors/Creators

  • 1. Boehringer Ingelheim
  • 2. @czbiohub
  • 3. Institute of Cancer Sciences, University of Glasgow
  • 4. @qbicsoftware
  • 5. @SciLifeLab | Karolinska Institutet

Description

Several updates / fixes have been added, prior to converting the pipeline to DSLv2 and adding more advanced features.

  • Template update with latest nf-core/tools v1.13.2
  • Parameters JSON Schema added #42
  • 25 Fix small documentation error with wrong parameter for txp2gene
Fixes
  • #20 Fix Transcriptome Fasta argument not detected well
  • #21 Fix --kallisto_index being ignored

Files

nf-core/scrnaseq-1.1.0.zip

Files (21.9 MB)

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md5:be698ed878058e066c87e316cd8a132d
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Additional details

Related works

Is supplement to
https://github.com/nf-core/scrnaseq/tree/1.1.0 (URL)