Published February 7, 2016
| Version v1.7.0
Software
Open
scrm: Version 1.7.0
Authors/Creators
- 1. Looking For Jobs
- 2. University of Oxford WTCHG
- 3. Wellcome Trust Centre for Human Genetics
Description
New Features
- New command line option "--transpose-segsites" that prints the segregating sites matrix with rows repesenting mutations instead of individuals. This also adds the time at which the mutation occurred as additional information (#85).
- scrm now throws an error when mutation or recombination rate changes have invalid sequence positions (#82).
- The length of segments between recombinations is now always reported in non-scientific notation (#81).
- Improved the error message when lines could not coalescence because of missing migration or negative population growth (#87).
- Forest.coalescence_finished has not set to true after a pairwise coalescence event (#89). This had no effect on the command line version of scrm.
- Fixes scrm's tests suite on 32 bit systems (#98).
Files
scrm-v1.7.0.zip
Files
(467.7 kB)
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md5:5462f62f8557be21d383e29770271a2f
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Additional details
Related works
- Is supplement to
- https://github.com/scrm/scrm/tree/v1.7.0 (URL)