S75 | CyanoMetDB | Comprehensive database of secondary metabolites from cyanobacteria
Creators
- 1. Eawag
- 2. University of São Paulo
- 3. University of Gdansk
- 4. University of Napoli Federico II
- 5. National Research Council Canada
- 6. University of Helsinki
Description
This is the collection associated with list S75 CyanoMetDB Comprehensive database of secondary metabolites from cyanobacteria on the NORMAN Suspect List Exchange.
https://www.norman-network.com/nds/SLE/
CyanoMetDB is a comprehensive database of secondary metabolites from cyanobacteria manually curated from primary references described in Jones et al (2021), DOI: 10.1016/j.watres.2021.117017 (preprint DOI: 10.1101/2020.04.16.038703)
Contents:
Original database: CyanoMetDB_WR_Feb2021.csv and CyanoMetDB_WR_Feb2021.xlsx
Reference information (only) expanding Ref entries in database: CyanoMetDB_References_v02_WR_Feb2021.csv and CyanoMetDB_References_v02_WR_Feb2021.xlsx
MetFrag local CSV file (original database abridged and reformatted for use in MetFrag): CyanoMetDB_MetFrag_Feb2021.csv
Additional files for matching InChIKeys (rapid suspect flagging): CyanoMetDB_v02_InChIKeys.txt
DTXSIDs for CompTox LIST use only: CyanoMetDB_v02_DTXSIDs.txt
Changes in versions are documented in the changelog file: CyanoMetDB_WR_changelog.txt
NOTE: several "names" fields contain special characters, please use CSV name column entries with caution (refer to "*_CSV columns for plain text forms). Original entries with special characters are in the respective XLSX files.
Notes
Files
CyanoMetDB_MetFrag_Feb2021.csv
Files
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Additional details
Related works
- Is supplement to
- Journal article: 10.1016/j.watres.2021.1170173 (DOI)
- https://www.norman-network.com/nds/SLE/ (URL)