Published February 21, 2021
| Version 0.10.14
Software
Open
ICB-DCM/pyABC: pyABC 0.10.14
Authors/Creators
- 1. Helmholtz Munich + TUM
- 2. IRU Biomathematics @ Uni Bonn
- 3. CRTD, TU Dresden
Description
General:
- Speed up parameter handling (30% internal speed-up) (#387)
- Streamline testing via tox and pre-commit hooks, add flake8 config file (#408)
- Update to python 3.9 (#411)
- Extract PEtab bounds and nominal parameters (#416)
- Allow specifying parameter names in density plots (#416)
- Normalize look-ahead sampling by subpopulation ESS (#418, #421)
Documentation:
- Update contribution and issue guidelines (#408)
- Add example on yaml2sbml usage (#416)
- Clean up user docs on parallelization and storage (#419)
Fixes:
- Fix redis for later started workers (#410)
- Fix PEtab parameter scale import, support all PEtab prior distributions (#413)
Database:
- Add database migration scheme based on alembic (#419)
- Store proposal ids, increment database version to 0 (#419)
Files
ICB-DCM/pyABC-0.10.14.zip
Files
(19.5 MB)
| Name | Size | Download all |
|---|---|---|
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md5:6bb1b8764284bc2f84bfd40b2c66d0b2
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Additional details
Related works
- Is supplement to
- https://github.com/ICB-DCM/pyABC/tree/0.10.14 (URL)