Published February 3, 2021
| Version v0.8.4
Software
Open
a-h-b/dadasnake: waffle of content
Description
- this version of dadasnake will run downsampling of reads between filtering and error estimation, if you ask it to - since the implementation in R's shortRead package is not reliable for downsampling paired reads, it uses seqtk (I apologize to anyone who's downloaded versions 0.8-0.83, where this didn't work properly).
- the read-trimming/filtering has gained a few options, namely trim_left and the need to specify trunc_qual separately for both reads
- assignment of fungalTraits (https://link.springer.com/article/10.1007/s13225-020-00466-2#data-availability) by matching genus names is possible - we're working on making this even more useful in the next version.
- blast results are slightly better formatted.
Files
a-h-b/dadasnake-v0.8.4.zip
Files
(3.5 MB)
| Name | Size | Download all |
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md5:29985e07d04fe84215ab66c287c40fc7
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Additional details
Related works
- Is supplement to
- https://github.com/a-h-b/dadasnake/tree/v0.8.4 (URL)