There is a newer version of the record available.

Published January 19, 2021 | Version v0.4.2
Software Open

seq2science

Contributors

Project member (2):

  • 1. Radboud University

Description

Automated preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and RNA-seq workflows.

Changed
  • Updated kb-python to 0.25.1
  • RNA-seq with Salmon will still use bam-related QC files if bams are generated (create_trackhub = True)
Fixed
  • gimmemotifs not working with newest pandas, now a fixed pandas version

Files

vanheeringen-lab/seq2science-v0.4.2.zip

Files (1.0 MB)

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md5:33334295be20831654396006170b681a
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Additional details

Related works

Is supplement to
https://github.com/vanheeringen-lab/seq2science/tree/v0.4.2 (URL)