Published October 23, 2020 | Version v1
Dataset Open

Microbiome dataset used in SIMON analysis for early-stage detection of cancer

Authors/Creators

  • 1. University of Oxford

Contributors

  • 1. City University of New York

Description

The Zeller dataset contains information on the microbiome species abundance in healthy individuals and colorectal cancer patients (doi: 10.15252/msb.20145645) and was used for the SIMON analysis as described (https://doi.org/10.1101/2020.08.16.252767). The data was access through MetagenomicData package as described by Pasolli and colleagues (doi: 10.1038/nmeth.4468). In total 184 individuals were included of which 93 were healthy controls and 91 colorectal cancer patients.

Files

Zeller.csv

Files (15.7 MB)

Name Size Download all
md5:c185b025c83267e1263de471a272960a
15.7 MB Preview Download

Additional details

Funding

European Commission
FluPRINT - Tracing the inFLUenza vaccine imPRINT on immune system to identify cellular signature of protection 796636