Published July 15, 2021
| Version v1.4.0
Software
Open
biowdl/expression-quantification: Release 1.4.0
Authors/Creators
- 1. Leiden University Medical Center
- 2. @LUMC
- 3. Leiden University Medical Center (LUMC)
Description
- Replaced Stringtie merge with gffcompare for merging of stringtie assembly results.
- Downgrade stringtie to version 1.3.6.
- Make it possible to not run Stringtie.
- When multiple TPM/FPKM values are returned for a single gene by stringtie, they will now be added together in the multi-sample expression tables. Previously only the last value encountered would be used.
- Updated default docker image for collect-columns (now uses version 1.0.0 instead of 0.2.0).
Files
biowdl/expression-quantification-v1.4.0.zip
Files
(676.5 kB)
| Name | Size | Download all |
|---|---|---|
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md5:d73ab28bffa911f1ba03ba47058e8c35
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Additional details
Related works
- Is supplement to
- https://github.com/biowdl/expression-quantification/tree/v1.4.0 (URL)