Published July 22, 2020 | Version v1
Dataset Open

GREEN-VARAN scores resources (GRCh37)

Authors/Creators

  • 1. Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK

Description

Processed non-coding prediction scores to be used with GREEN-VARAN

This dataset contains the GRCh37 version for the following scores:

If you use any of these score annotations with GREEN-VARAN please cite also the corresponding paper.

Files

Files (29.1 GB)

Name Size Download all
md5:984d36b8b9df293312a04a390bcf97a7
1.3 GB Download
md5:1a52265fc175c19836ab476948124dad
421.3 kB Download
md5:5950fec3cf0852ed6456c78ed3a9c398
726.7 MB Download
md5:c8071dc4916535780a4f2567af050800
6.2 MB Download
md5:54efd0cee3c8fbd34ec71a734c22d2c0
1.6 GB Download
md5:55f39bc12f5304e1da4c770bcac39625
191.3 kB Download
md5:26a6f4f9fa0c5356836658dd6e209670
13.5 GB Download
md5:908b3dd2ea149a777a32d02e3e0ae980
2.8 MB Download
md5:5dd21718323e7919e18336cae14568fd
11.9 GB Download
md5:01dcdbc48aeeed262e060846b7d1f8aa
7.5 MB Download

Additional details

Related works

Is derived from
Dataset: https://zenodo.org/record/1197579/files/ReMM.v0.3.1.tsv.gz (URL)
Dataset: https://storage.googleapis.com/ncboost-cbl/ncboost_score_hg19_v20190108.tsv.gz (URL)
Dataset: http://deepsea.princeton.edu/media/code/expecto/all1kbmutations.tar (URL)
Dataset: http://compgen.cshl.edu/LINSIGHT/LINSIGHT.bw (URL)
Dataset: ftp://ftp.sanger.ac.uk/pub/resources/software/gwava/v1.0/VEP_plugin/gwava_scores.bed.gz (URL)

References