Published October 4, 2018 | Version v5

Variant Calling Analysis

Authors/Creators

  • 1. UPM

Description

Msc in Computational Biology of Universidad Politécnica de Madrid (UPM)

Course: Genomics Data Analysis and Visualization

Lesson 1: Read mapping and variant calling

This tutorial is designed to introduce the tools, data types and workflow of variant detection. We will align reads to the genome, look for differences between reads and reference genome sequence, and filter the detected genomic variation manually to understand the computational basis of variant calling.

 

Files

Lesson_2_variant_calling.pdf

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