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Published July 13, 2020 | Version v0.11.0b8
Software Open

PartSeg - segmentation and reconstruction tool for 3D microscopy images

Authors/Creators

  • 1. Centre of New Technologies, University of Warsaw, Warsaw, Poland; Institute of Informatics, University of Warsaw, Warsaw, Poland
  • 2. Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland
  • 3. Institute of Informatics, University of Warsaw, Warsaw, Poland

Contributors

  • 1. Centre of New Technologies, University of Warsaw, Warsaw, Poland; Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland

Description

0.11.0
  • Make sprawl algorithm name shorter
  • Unify capitalisation of measurement names
  • Add simple measurements to mask segmentation
  • Use napari as viewer
  • Add possibility to preview additional output of algorithms (In View menu)
  • Update names of available Algorithm and Measurement to be more descriptive.
Changes:
  • d8054e05f363d81f42059db9da4e2be95482e3e0 fix PARTSEG-5V
  • 15439225aadc62142da7116a7f08219ada4b3ac6 Add napari plugin to save segmentation
  • ad066e38d0dc87b16850bf9543b5508c63badfa6 fix mask create function
  • 678409b829c27b59ecfa9acaaca63f758577cb1c add temporary workaround for memory error when creating labels layer
  • 3d99edda792f39d99f8a50576149e3662b7be4db fix flow on 2d images
  • e9ce215b61b588327f6cfc079575f7f0245bb185 introduce small default single step for CustomDoubleSpinBox
  • 742ccaf57f610f78f72affbab44024f5f128162b add check if test are executed

This list of changes was auto generated.

Files

4DNucleome/PartSeg-v0.11.0b8.zip

Files (3.5 MB)

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md5:1349b595dc148fb8e51933c1f2ffcf57
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Additional details

Related works

Is supplement to
https://github.com/4DNucleome/PartSeg/tree/v0.11.0b8 (URL)