Published January 18, 2021
| Version 1.1
Dataset
Open
Haber2017 (GSE92332) mouse intestine dataset for Besca
Authors/Creators
- 1. Roche Pharma Research and Early Development
Description
Here we used Besca to reprocessed the mouse small intestine single cell transcriptomics dataset GSE92332 downloaded from GEO. It was originally published by [Haber et al. Nature. 2017] and also used in the best practices paper by [Luecken & Theis. Mol Syst Biol. 2019].
Files
Files
(459.6 MB)
| Name | Size | Download all |
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md5:af9bd107df68a0c53d7f314463a943b7
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278.8 MB | Download |
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md5:6e8d8a4184a7a046bb72291ef8cd82b6
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180.8 MB | Download |
Additional details
References
- Haber AL, Biton M, Rogel N, et al. A single-cell survey of the small intestinal epithelium. Nature. 2017;551(7680):333-339. doi:10.1038/nature24489
- La Manno G, Soldatov R, Zeisel A, et al. RNA velocity of single cells. Nature. 2018;560(7719):494-498. doi:10.1038/s41586-018-0414-6
- Luecken MD, Theis FJ. Current best practices in single-cell RNA-seq analysis: a tutorial. Mol Syst Biol. 2019;15(6):e8746. Published 2019 Jun 19. doi:10.15252/msb.20188746