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Published July 3, 2020 | Version v0.11.0b5
Software Open

PartSeg - segmentation and reconstruction tool for 3D microscopy images

Authors/Creators

  • 1. Centre of New Technologies, University of Warsaw, Warsaw, Poland; Institute of Informatics, University of Warsaw, Warsaw, Poland
  • 2. Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland
  • 3. Institute of Informatics, University of Warsaw, Warsaw, Poland

Contributors

  • 1. Centre of New Technologies, University of Warsaw, Warsaw, Poland; Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland

Description

0.11.0
  • Make sprawl algorithm name shorter
  • Unify capitalisation of measurement names
  • Add simple measurements to mask segmentation
  • Use napari as viewer
  • Add possibility to preview additional output of algorithms (In View menu)
  • Update names of available Algorithm and Measurement to be more descriptive.
Changes:
  • 8842fbb0d29067c0211afbfc684e0f50bab009ca fix blinking mask segmentation
  • b3c6814364931002fcb4c59cd00eda47addf807f fix formating
  • 4d2f0585c654951fc36bfa0d20c84c1ffb5c2390 fix PARTSEG-5A fix PARTSEG-59
  • 8a0e21b36625848c202bb9176695e6b46deb5f71 fix PARTSEG-58
  • d77216eea955215affa2e2e7db28ebf86229cdd9 add colormaps when creating napari viewer instance
  • 9215e25c78d4dc21507688282c13a94a86762bf2 Update launcher_main.py

This list of changes was auto generated.

Files

4DNucleome/PartSeg-v0.11.0b5.zip

Files (3.5 MB)

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md5:627b8081fdf85721d832770623fdd03f
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Additional details

Related works

Is supplement to
https://github.com/4DNucleome/PartSeg/tree/v0.11.0b5 (URL)