elysheba / public-dodo:20.04.2020

This docker image provides an image of the DODO (Dictionary of Disease Ontologies) graph database. It aims to provide a more complete mapping across the multitude of disease ontologies and a comprehensive way to explore and interact with disease and phenotype ontologies. It includes the ontologies listed below: 

- MonDO
- EFO
- DO
- ICD11
- MedGen
- MeSH
- HPO (phenotype ontology)
- ClinVar

To download and load the image
```
gzip -d docker-ucb-public-dodo-20.04.2020.tar.gz
cat docker-ucb-public-dodo-20.04.2020.tar | docker load
```

Run the image

```
docker run -d \
--name public-dodo\
--restart always \
--publish=7476:7474 \
--publish=7689:7687 \
--env=NEO4J_dbms_memory_heap_initial__size=4G \
--env=NEO4J_dbms_memory_heap_max__size=4G \
--env=NEO4J_dbms_memory_pagecache_size=2G \
--env=NEO4J_dbms_query__cache__size=0 \
--env=NEO4J_cypher_min__replan__interval=100000000ms \
--env=NEO4J_cypher_statistics__divergence__threshold=1 \
--env=NEO4J_dbms_security_procedures_unrestricted=apoc.\\\* \
--env=NEO4J_dbms_directories_import=import \
--env NEO4J_AUTH=none\
elysheba/public-dodo:20.04.2020
```

Updates will be available on: https://hub.docker.com/repository/docker/elysheba/public-dodo