Published February 27, 2020
| Version v1.0
Software
Open
ya-sainthood/chromosome_comparison: First release of the chromosome comparison protocol
Authors/Creators
Description
This protocol is based on the procedure that we used to analyze the homologous chromosomal region of the ladybird beetle color pattern locus. We mainly use Easyfig software and provide an additional custom Perl script and a test dataset for fine visualization of chromosomal similarities. You can read a Japanese commentary on this protocol in Jisedai Sequencer DRY Kaiseki Kyohon 2nd Ed (次世代シーケンサーDRY解析教本 改訂第2版), Gakken Medical Shueisha, Tokyo, 2019, pp369-370.
Files
ya-sainthood/chromosome_comparison-v1.0.zip
Files
(4.9 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/ya-sainthood/chromosome_comparison/tree/v1.0 (URL)
References
- Ando et al, 2018, Nature Commucniations, 9:3843. A dataset and scripts used in drawing Figure 5a.