Published March 13, 2019 | Version 1.0
Dataset Open

MAGpurify database

Authors/Creators

  • 1. DOE Joint Genome Institute

Description

This is the database used by MAGpurify to identify potential contaminants in metagenome-assembled genomes (MAGs). It includes:

  • BLAST databases for the human (GRCh37) and PhiX genomes. Used to identify contigs that come from these two common sources of contamination.
  • A database of phylogenetic marker genes from the PhyEco database. Used to identify taxonomically discordant contigs.
  • A database of clade-specific markers from the MetaPhlAn v2.0 database. Used to identify taxonomically discordant contigs.

Files

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