Published February 22, 2020
| Version 1.7.4
Software
Open
nextgenusfs/funannotate: funannotate v1.7.4
Creators
- 1. USDA Forest Service
- 2. University of California-Riverside
Description
Okay, so apparently I lied about bug fixes before py3 release. Here are some quick ones.
Also -- some users have said that conda recipe fails to find a solution, with the help of @reslp this is perhaps caused by ete3
package as a dependency. Since ete3
is only used in funannotate
for the dN/dS calculation in funannotate compare
, I'm going to remove it from conda recipe as a dependency. Users that would like to continue using the dN/dS function in compare will need to manually install ete3 (ie conda could work on your system or pip, etc).
- update the log file copy/remove in
funannotate annotate
which causes a problem in singularity container - encoding bug fixes for some PFAM results
- fix for
funannotate iprscan
which was not correctly combining XML files with newer versions of Interproscan.
Files
nextgenusfs/funannotate-1.7.4.zip
Files
(494.5 kB)
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Additional details
Related works
- Is supplement to
- https://github.com/nextgenusfs/funannotate/tree/1.7.4 (URL)