There is a newer version of the record available.

Published February 18, 2020 | Version v0.4.0
Software Open

boulund/stag-mwc: StaG-mwc v0.4.0

Authors/Creators

  • 1. Karolinska Institute

Description

First release in the 0.4.0 series

Changes

This version introduces a lot of changes, most notably probably the change from BBMap as host removal tool, now replaced with Kraken2. This version also adds the basic skeleton for per-sample metagenome assembly and binning, based on metaWRAP. Note that this is fairly untested sections of the workflow as of now.

For a complete list of changes, please review CHANGELOG.md.

This release also adds continuous integration testing via CircleCI, but still only in a basic form.

There are a few known issues with this release. Please create new issues if you encounter anything strange

Files

stag-mwc-0.4.0.zip

Files (784.4 kB)

Name Size Download all
md5:96fca9018c78bd0265ad69980f55e0d9
784.4 kB Preview Download

Additional details

Related works

Is supplement to
https://github.com/boulund/stag-mwc/tree/v0.3.0-beta (URL)