Published January 12, 2020
| Version v1
Dataset
Open
Simulation of POPC:POPE 1:1 membrane with the Slipids force field
Authors/Creators
- 1. Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
Description
A POPC:POPE 1:1 bilayer with 100 lipids per leaflet is simulated for 300 ns using the Slipids model and Gromacs simulation engine version 2019.4. The trajectory (.xtc) is saved every 100ps. The simulation parameters (.mdp), the energy file (.edr), the continue point to extend the simulation (.cpt), the run input parameters (.tpr), and the final structure (.gro) are also given. The lipid topologies (.itp) are provided, and the Slipids force field is available at http://www.fos.su.se/~sasha/SLipids/
Files
Files
(614.1 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:dd65d1eb02b3698bdea6c6bd9fbabba8
|
1.2 kB | Download |
|
md5:01ba80beaabf3f41a78a533b56522493
|
1.3 MB | Download |
|
md5:91d54d61000604f8a8d5d0820ad68681
|
20.2 MB | Download |
|
md5:a5bfa07668eba567e5dc340a060a4004
|
3.7 MB | Download |
|
md5:68a3ba7a4f11097f37a62aeb3a6183d4
|
1.6 MB | Download |
|
md5:d52f56e31e0a4542f6e47f81c4ceebdb
|
587.3 MB | Download |
|
md5:d1366e8d8438a54fb5b167c864792328
|
38.1 kB | Download |
|
md5:78e35b3f43b0a864c6271436739abb63
|
35.6 kB | Download |