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Published December 19, 2019 | Version v0.2.7
Software Open

napari/napari: 0.2.7

Authors/Creators

  • 1. CZI
  • 2. @chanzuckerberg
  • 3. Monash Micro Imaging, Monash University
  • 4. Chan Zuckerberg Biohub
  • 5. Harvard University
  • 6. starting something new
  • 7. Cell Microsystems
  • 8. CZ BioHub
  • 9. Chan Zuckerberg Initiative
  • 10. CZ BIohub
  • 11. The University of Washington eScience Institute
  • 12. UC Merced
  • 13. Vanderbilt University
  • 14. MorphogĂ©nie Logiciels SAS
  • 15. Monash University
  • 16. @BIDS

Description

Announcement: napari 0.2.7

We're happy to announce the release of napari 0.2.7! napari is a fast, interactive, multi-dimensional image viewer for Python. It's designed for browsing, annotating, and analyzing large multi-dimensional images. It's built on top of Qt (for the GUI), vispy (for performant GPU-based rendering), and the scientific Python stack (numpy, scipy).

For more information, examples, and documentation, please visit our website: https://github.com/napari/napari

Highlights
  • Play button for animating axes now in the GUI
  • Threshold slider for much improved isosurface rendering
  • Dockable widgets
  • Slice information on sliders
  • Dramatically improved performance with many invisible layers
  • Adopted a governance model with a mission and values statement
  • Added a new core dev guide
New Features
  • Add governance model, mission and values, core dev guide (#655)
Improvements
  • Iso-surface threshold slider (#712)
  • Add play button to GUI (#726)
  • Make layers list dockable (#727)
  • Add Zenodo badge to documentation (#743)
  • Add a dock icon (#744)
  • Show splash screen for cli launch (#745)
  • Add benchmarks for setting .data in Image layers (#747)
  • Refactor layer tests to be more parametrized (#723)
  • Support opening labels layers via directly from path (#748)
  • Simplify keybindings info display (#749)
  • Clean up info box (#750)
  • Display slice info on right of slider (#759)
  • Block refresh for invisible layers (#776)
  • About copy button to info display box (#798)
  • Add blocked_signals context manager (#797)
  • Better selected menu header background color (#813)
Bugfixes
  • Fix StringEnum setting and errors (#757)
  • scale argument now accepts array-like input (#765)
  • fix set_fps type to float (#767)
  • Add shutdown method to QtViewer that closes all resources (#769)
  • Change language around windows support in readme (#779)
  • Revert #784 console shutdown conditionals (#796)
  • Fix window raise & inactive menubar conflict (#795)
  • Change documentation on qt.py folder location (#783)
  • Updating qt_console with better resource management (#784)
  • Respect vispy max texture limits (#788)
  • Fix (minor) deprecation warnings (#800)
  • Fix FPS spin box on Qt < 5.12 (#803)
  • Bumpy vispy dependency to 0.6.4 (#807)
  • Set threshold for codecov failure (#806)
  • Rename util to utils in MANIFEST.in (#811)
  • Add requirements/release.txt with release dependencies (#809)
API Changes
  • Rename util to utils across repo (#808)
  • Move Labels utility functions to labels_util.py (#770)
  • Move Image layer utility functions to image_utils.py (#775)
  • Move Layer utility functions to /napari/layers/layer_utils.py (#778)
  • Refactor util.misc (#781)
  • Drop ndim keyword from labels layer (#773)
7 authors added to this release [alphabetical by first name or login]
  • Genevieve Buckley
  • Kevin Yamauchi
  • Kira Evans
  • Nicholas Sofroniew
  • Peter Boone
  • Shannon Axelrod
  • Talley Lambert
7 reviewers added to this release [alphabetical by first name or login]
  • Ahmet Can Solak
  • Juan Nunez-Iglesias
  • Kevin Yamauchi
  • Kira Evans
  • Nicholas Sofroniew
  • Shannon Axelrod
  • Talley Lambert

Files

napari/napari-v0.2.7.zip

Files (2.1 MB)

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Additional details

Related works

Is supplement to
https://github.com/napari/napari/tree/v0.2.7 (URL)