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Published December 4, 2019 | Version 1.5.3rc1
Software Open

fMRIPrep: a robust preprocessing pipeline for functional MRI

Authors/Creators

  • 1. Department of Psychology, Stanford University
  • 2. Montreal Neurological Institute, McGill University
  • 3. Neuroscience Program, University of Iowa

Contributors

  • 1. Department of Psychology, Florida International University
  • 2. Department of Psychology, Stanford University
  • 3. Montreal Neurological Institute, McGill University
  • 4. Department of Psychology, Columbia University
  • 5. Center for Lifespan Changes in Brain and Cognition, University of Oslo
  • 6. Department of Psychology, University of California, Berkeley
  • 7. CENIR, INSERM U1127, CNRS UMR 7225, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle épinière, ICM, F-75013, Paris, France
  • 8. Child Mind Institute
  • 9. Dartmouth College: Hanover, NH, United States
  • 10. Computational Neuroimaging Lab, BioCruces Health Research Institute
  • 11. Department of Psychiatry, McGill University
  • 12. URPP Dynamics of Healthy Aging, University of Zurich
  • 13. Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen
  • 14. State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University
  • 15. Center for Brain Imaging, New York University
  • 16. Neuroscience Program, University of Iowa
  • 17. Perelman School of Medicine, University of Pennsylvania, PA, USA
  • 18. Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University in Toruń
  • 19. Max Planck Institute for Empirical Aesthetics
  • 20. Cyceron, UMS 3408 (CNRS - UCBN), France
  • 21. Speech & Hearing Bioscience & Technology Program, Harvard University
  • 22. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
  • 23. Department of Neuroscience, University of Pennsylvania, PA, USA
  • 24. McGovern Institute for Brain Research, MIT, MA, USA

Description

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

Files

poldracklab/fmriprep-1.5.3rc1.zip

Files (23.7 MB)

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Additional details

Related works

Documents
https://fmriprep.org (URL)
Is part of
10.1038/s41592-018-0235-4 (DOI)