impetuous-gfa
Description
# Simple Group Analysis
Decomposes a set of expressions into a group expression.
The toolkit currently offers enrichment analysis, hierarchical enrichment analysis as well group decomposition analysis. The expression regulation can be studied via a statistical test that relates it to the observables in the journal file. The final p values are then FDR corrected and the resulting adjusted p values are produced. Several methods for merging p values are also present.
The journal and analyte expression file must be ordered the same way with respect to the samples that are
positioned on the columns.
https://pypi.org/project/impetuous-gfa/
https://github.com/richardtjornhammar/impetuous
Files
Files
(307.6 kB)
Name | Size | Download all |
---|---|---|
md5:6683ceda445d904d28b7d1d20af9d522
|
1.3 kB | Download |
md5:c5233dbba52e43c4b0ec2a3af64d3e33
|
10.9 kB | Download |
md5:0d0028dcd5660a5e1deb7b2ded41fe40
|
11.6 kB | Download |
md5:5e2bbb1f9e5433912aa5bd5ab55664a7
|
12.1 kB | Download |
md5:0610bf33fe56564031b1eb1454fd4374
|
12.2 kB | Download |
md5:4c774a39396aee1ac189e89b7b1643a5
|
12.9 kB | Download |
md5:8d1938cab76cb5a338dc943735075aec
|
14.9 kB | Download |
md5:84052746266bd028a1bf6e47ab669de5
|
10.1 kB | Download |
md5:358774e2d32f392ef03f4462427ead3d
|
10.6 kB | Download |
md5:95a8149a4bc61b7c88631da9c5749d64
|
10.6 kB | Download |
md5:7937c09e4c7dc34f5887251ee05d0db0
|
15.1 kB | Download |
md5:a62092b9264a9f3aa749c4f327e1abe1
|
16.5 kB | Download |
md5:1344feabd8f8fa264fe8ffa56fa5ed0e
|
16.7 kB | Download |
md5:a5a39340a0978240fd841b02f187559b
|
17.0 kB | Download |
md5:54471b2ad85cde29bcbb47d932e405a2
|
16.7 kB | Download |
md5:144862a0a28c58481b7d822fabadb572
|
17.5 kB | Download |
md5:d623ffe42d68267dec6be0412d0b1667
|
18.0 kB | Download |
md5:3ddaa2662ea04319f19478e5f7904c68
|
20.5 kB | Download |
md5:0e4e8c9eea661ac8b97c0395e072e3b6
|
20.7 kB | Download |
md5:cd4c2a936849ee00f626069fe999816e
|
20.8 kB | Download |
md5:c7814287e02d6b2561b135bd2cc4f245
|
20.9 kB | Download |