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Published October 1, 2019 | Version 2a
Dataset Open

Polymerase Structure Alignments - v2a Update (October 2019)

Creators

  • 1. Colorado State University

Contributors

Project leader:

  • 1. Olve

Description

October 1, 2019 update (v2a) of superposed viral polymerase structures using the methodology described in 
A Comprehensive Superposition of Viral Polymerase Structures by Olve Peersen, Viruses 2019 11(8) 745.

  •  _All_PDBs_v2a.zip contains a single directory with coordinate files for 673 structures taken from 429 PDB entries.

  • Polymerases_v2a.zip contains the complete set of files from the superpositions, including the _All_PDBs/ directory.

 

From the included version history file:

v2a    190930    

        fluv: Added 6qnw, 6qpf, 6qpg, 6qwl, 6qx3, 6qx8, 6qxe, 6rr7 
        fmdv: Added 6s2l
        nsrn: Added 6pzk, 6u5o - RSV and HMPV polymerases
        pico: Added 6QWT, 6R1I - PRE-RELEASE verisons of sicinivirus A and aichivirus (kobuvirus) polymerases.
        reov: Added 6pns, 6po2 - Bluetonguevirus polymerase

 

Notes

Supported by National Institutes of Health (US) grant R01 AI059130 to O.P.

Files

_All_PDBs_v2a.zip

Files (1.2 GB)

Name Size Download all
md5:b1f09e2ab73235ba0decc03ad472673e
305.9 MB Preview Download
md5:ddd9635da8fbc22a6ba749ed5483fef7
890.8 MB Preview Download

Additional details

Related works

References

  • Peersen OB, A Comprehensive Superposition of Viral Polymerase Structures, Viruses 2019 11(8) 745.