Published November 3, 2016 | Version v1
Poster Open

Analysis of runs of homozygosity in local and commercial italian pig breeds

  • 1. Department of Agricultural and Food Sciences, University of Bologna
  • 2. ConSDABI - National Focal Point Italiano FAO
  • 3. Associazione Nazionale Allevatori Suini

Description

Runs of homozygosity (ROH) are defined as continuos and uninterrupted chromosome regions in which all loci are homozygous in an individual, even if in the population these loci are not fixed for any allele. ROH are single nucleotide polymorphism (SNP)-derived metrics of autozygosity and provide a DNA based measure of the inbreeding level, as the two homozygous long DNA streches are considered identical by descent (IBD). 

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Additional details

Funding

European Commission
TREASURE – DIVERSITY OF LOCAL PIG BREEDS AND PRODUCTION SYSTEMS FOR HIGH QUALITY TRADITIONAL PRODUCTS AND SUSTAINABLE PORK CHAINS 634476