There is a newer version of the record available.

Published September 11, 2019 | Version v1.0
Other Open

Supplementary Material for Zitovsky and Love 2019

Authors/Creators

  • 1. University of North Carolina at Chapel Hill

Description

This repository contains supplementary material associated with Zitovsky and Love 2019. If any material from this repository is used to conduct original research leading to published work. please cite the Zitovsky and Love 2019 paper instead of this repository. This repository contains the Supplementary Methods section as well as the Supplementary Figures and Tables section of Zitovsky and Love 2019.

Files

Supplementary Figures and Tables.pdf

Files (1.4 MB)

Name Size Download all
md5:123dcbddcc2981ea2e89b30ee99ba420
1.2 MB Preview Download
md5:a04ed8bd426045ccdfddd49cc6b8defb
191.0 kB Preview Download

Additional details

Related works

Is supplement to
https://doi.org/DOESNOTEXISTYET (URL)

References

  • Zitovsky, Joshua P. and Michael I. Love. "Fast Effect Size Shrinkage Software for Beta-Binomial Models of Allelic Imbalance." F1000Research. September 2019.
  • Gelman, Andrew et. al. 2008. "A Weakly Informative Default Prior Distribution for Logistic and Other Regression Models." The Annals of Applied Statistics 2 (4): 1360-1383. https://doi.org/10.1371/journal.pone.0099625.
  • Love, Michael, Wolfgang Huber, and Simon Anders. 2014. "Moderated Estimation of Fold Change and Dispersion for RNA-Seq Data with DESeq2." Genome Biology 15 (12): 550. https://doi.org/10.1186/s13059-014-0550-8.
  • Nocedal, Jorge. 1980. "Updating Quasi-Newton Matrices with Limited Storage." Mathematics of Computation 35 (151): 773-782. https://doi.org/10.1090/S0025-5718-1980-0572855-7.
  • Qiu, Yixuan et. al. 2018. "'Rcpp' Integration for Numerical Computing Libraries." R package version 0.3-2. https://CRAN.R-project.org/package=RcppNumerical.
  • Bolker, Ben. 2019. "emdbook: Ecological Models and Data in R." R package version 1.3.11. https://CRAN.R-project.org/package=emdbook.
  • Brent, R. 1973. "Algorithms for Minimization without Derivatives." Englewood Cliffs N.J.: Prentice-Hall. ISBN: 978-0-486-41998-5