Published March 18, 2019 | Version v1
Journal article Open

Azabicyclic vinyl sulfones for residue-specific dual protein labelling

  • 1. Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla
  • 2. Department of Chemistry, University of Cambridge
  • 3. Department of Chemistry, University of Cambridge. Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa
  • 4. CIC bioGUNE. Departamento de Química, Universidad de La Rioja
  • 5. Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa

Description

We have developed [2.2.1]azabicyclic vinyl sulfone reagents that simultaneously enable cysteine-selective protein modification and introduce a handle for further bioorthogonal ligation. The reaction is fast and selective for cysteine relative to other amino acids that have nucleophilic side-chains, and the formed products are stable in human plasma and are moderately resistant to retro Diels–Alder degradation reactions. A model biotinylated [2.2.1]azabicyclic vinyl sulfone reagent was shown to efficiently label two cysteine-tagged proteins, ubiquitin and C2Am, under mild conditions (1–5 equiv. of reagent in NaPi pH 7.0, room temperature, 30 min). The resulting thioether-linked conjugates were stable and retained the native activity of the proteins. Finally, the dienophile present in the azabicyclic moiety on a functionalised C2Am protein could be fluorescently labelled through an inverse electron demand Diels–Alder reaction in cells to allow selective apoptosis imaging. The combined advantages of directness, site-specificity and easy preparation mean [2.2.1]azabicyclic vinyl sulfones can be used for residue-specific dual protein labelling/construction strategies with minimal perturbation of native function based simply on the attachment of an [2.2.1]azabicyclic moiety to cysteine.

Notes

We thank the Universidad de Sevilla (E. G. M. short stay PP2017-8144), the Spanish Ministry of Education, Culture and Sport under the FPU program (E. G. M.), the Spanish Ministry of Economy and Competitiveness (CTQ2016-77270-R to A. J. M.-V., E. G. M. and I. R. and CTQ2015-70524-R and RYC-2013-14706 to G. J.-O. and C. D. N.), the EU (Marie-Sklodowska Curie ITN Protein Conjugates to G. J. L. B., GA No. 675007; MarieSklodowska Curie IEF to B. L. O., GA No. 702574 and to E. J. M., GA No. 701473), FCT Portugal (FCT Investigator to G. J. L. B., IF/00624/2015 and postdoctoral fellowship SFRH/BPD/103172/2014 to P. M. S. D. C.), and the EPSRC (grant EP/M003647/1 to G. J. L. B.) for funding. We thank Dr André Neves and Prof. Kevin Brindle for providing the C2Am protein; Dra. Elena Moreno Clavijo for her helpful discussions, and Dr. Vikki Cantrill for her help with the preparation and editing of this manuscript. We also thank CITIUS for NMR and mass spectrometry assistance and BERONIA (Universidad de La Rioja) for computer support. G. J. L. B. is a Royal Society University Research Fellow (UF110046 and URF\R\180019) and the recipient of a European Research Council Starting Grant (TagIt, GA No. 676832).

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Additional details

Funding

European Commission
TagIt - A Minimal-Tag Bioorthogonal Labelling Approach to Protein Uptake, Traffic and Delivery 676832