Published July 30, 2019
| Version v1
Journal article
Open
Two Years of Viral Metagenomics in a Tertiary Diagnostics Unit: Evaluation of the First 105 Cases
Authors/Creators
- 1. Institute of Medical Virology, University of Zurich, Zurich, Switzerland
- 2. Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, Zurich, Switzerland
Description
Raw viral reads output of the "VirMet" pipeline for 163 specimens from 105 patient analysed by metagenomic sequencing.
Files are named in the format "<patient id>_<sample type>_<workflow (RNA/DNA) or replicate (1/2)> _viral_reads.fastq.gz".
Files
Files
(481.0 MB)
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md5:4c1095b75380947cf34c0b92f94db97d
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74.0 kB | Download |
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md5:d123541eaa23dc15373c855e55869176
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35.6 kB | Download |
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md5:612633bd7d863c8cf709cbcb930c33ca
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1.1 kB | Download |
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md5:fac7adc98c975415328061e1b133d22a
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19.6 kB | Download |
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md5:01bfbfe3b35063887709a0cbb5f063c9
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1.0 kB | Download |
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md5:625524c6a2a1d9299170e106660e6ed5
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9.9 kB | Download |
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md5:0ee5d0c96ed3ec10879afb4e27b12a3a
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17.9 kB | Download |
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md5:935c0e7124828b6aaa4de4b0b8e4e1d0
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27.9 kB | Download |
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md5:1d84c6164386059e2fc13e5e5a67e9a5
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6.5 kB | Download |
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md5:668a099e8b10b456ab44530becb205e8
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11.6 kB | Download |
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md5:4ceae26fc69c5f3d377400b46bab4857
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79.5 kB | Download |
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md5:a68eda37e476f682e9ee6fa68f0401a7
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19.8 kB | Download |
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md5:3d02dc41f03fc0b345ef0f832faf2bfc
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5.1 kB | Download |
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md5:6fc3fbbdbb3124a4e49790869ae9566c
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15.8 MB | Download |
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md5:d8ce8707b46316964629a362d2abb7ce
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3.4 kB | Download |
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md5:cf9f1deae4a5395bac822a6b21fc606d
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9.8 kB | Download |
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md5:bd69ac2efd899b31b27891b84bc197d1
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565.1 kB | Download |
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md5:565d10fd1b7886dfe122fea62d651b14
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52.2 kB | Download |
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md5:e2242a0aaf0930b3ea63f05a1ece20d9
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3.3 kB | Download |
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md5:8816f1a98219f038eca17588900e7dba
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4.8 kB | Download |
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md5:dee0712e3399536382de9040ce110511
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4.5 kB | Download |
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md5:5d55aa4d2d0d00558f39a2a913806d6d
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315 Bytes | Download |
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md5:1f5f12d402925dc291cb6b8b670d0b2a
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1.0 kB | Download |
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md5:10f18cf30af10c9dd57bdefb423ce216
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27.7 kB | Download |
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md5:b68e40d5005f72140024c29e7bb64c00
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3.9 kB | Download |
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md5:0c1e5921bffa08423352c0a2d94b3be0
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24.5 kB | Download |
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md5:63d75714f048c6ffbc5f155fe93d5438
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78.1 kB | Download |
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md5:357795fcc1e0bda0417ab6e858c91ae9
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14.4 kB | Download |
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md5:56860d69be06073c4da96869d6204621
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1.2 kB | Download |
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md5:019fa795b5c595460ed00eb9595b1b07
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1.2 kB | Download |
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md5:d628ce2ad9f444340344e331bec3afb2
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1.5 kB | Download |
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md5:297a0ce77789334981ba5606dae1fa33
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17.7 kB | Download |
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md5:0e9f8166b502d18edb035f9a80f32d00
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94.0 kB | Download |
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md5:68600c3cad520fc52a7b40ba70d69646
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224.3 kB | Download |
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md5:6917251bc9157e3e2743d43a9a66154e
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112.9 kB | Download |
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md5:a0ebe8d097a3ca8057b4c523769c505e
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7.6 kB | Download |
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md5:731d49ae30013ae12ad2eff14fe0ad14
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2.7 MB | Download |
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md5:850ecdda06bd9994094b4b30220b1eea
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17.8 kB | Download |
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md5:0cd50406b733d1e4e80b4758db02a84f
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5.7 kB | Download |
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md5:f39ea930ca4b6209a5bbc6e86acda0e6
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5.8 kB | Download |
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md5:32b3c4e465725810f9cafa65966cbfcf
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109.1 kB | Download |
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md5:03f14e10c8ed3c3b8f621ed5e1d374a6
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11.0 kB | Download |
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md5:714be9197c1c90a8f3b85093d02c18e0
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17.3 kB | Download |
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md5:77081cdacfded3b80bc5021700317930
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3.0 kB | Download |
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md5:6deefdae380e449ce669946a78b08dd1
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1.3 kB | Download |
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md5:78f110053151d1932f998be9bf08118a
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14.7 kB | Download |
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md5:5dcc8f00d0e6d6a219fdaff1f5540e31
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7.4 kB | Download |
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md5:361a9e8682c2ea1933873e8f2c1e41ea
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9.2 kB | Download |
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md5:17c3f72c4a88e9cc2b618a2feda7b4f1
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3.2 kB | Download |
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md5:c1a7d85d7bfb2866374401217c93069e
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6.4 kB | Download |
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md5:bacd27d01264ea13f8cf48a0cbb36306
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6.2 kB | Download |
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md5:09d73ea215980fafb56c3e6d564ecbfe
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20.1 kB | Download |
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md5:8b7fa60fc276495b778e2f1286ff2d30
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3.4 kB | Download |
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md5:3a4c02106d20bb3094d51866946afe60
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2.6 kB | Download |
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md5:14e9635fef994523e1c58fad16fdb0be
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2.7 kB | Download |
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md5:4956479c1cfc70a4b2df99a4d739c5ce
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14.8 kB | Download |
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md5:43a914434a4e183c053043be644f8249
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5.6 kB | Download |
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md5:e8724a8072dfab047f3005d03161d94c
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8.7 kB | Download |
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md5:a1a17562ad0894dde108ebc7ca1b3c65
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1.2 kB | Download |
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md5:9ccc5d6381354126c8d12486bbfebc98
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8.1 kB | Download |
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md5:27bc09d93cc1cc9d29b74d880a867f96
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6.8 kB | Download |
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md5:f911a2baf97c461c29d6b667d8c720b7
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23.3 kB | Download |
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md5:8e2a012b6f2f8382e52635ce9e616181
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52.9 kB | Download |
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md5:4e1cf1e125147f5fa98ecf9527c88833
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28.1 kB | Download |
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md5:59c7b708c521cd2ca09ade8c080c4b56
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12.5 kB | Download |
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md5:80bc74c74d247edcda949f6bd4367a20
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2.8 kB | Download |
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md5:fc254358c24dbd0427a8cc3efc4289a9
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3.0 kB | Download |
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md5:0b5ea07c004f2f3918d5f4889bde5e57
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38.9 kB | Download |
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md5:d87847ff70fd2680ee9086f367f57f56
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771.1 kB | Download |
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md5:0b315659923c8714d95a69d57fa2035e
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59.6 kB | Download |
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md5:d8d575880909a79fdbafb6e249ad6f42
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67.1 kB | Download |
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md5:c965f9df97ad01573797ccbf25c5a062
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8.3 kB | Download |
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md5:c8693efb87ee5e1ce3b7ae3292bd038d
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27.5 kB | Download |
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md5:e6d0399b06353c9d000ff615276ad2ef
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9.7 kB | Download |
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md5:c3d4afbf68395442871a9c7994cdc6a4
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4.7 kB | Download |
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md5:a374de6be7ede37fe2b3f1ecb6d0eaf7
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29.1 kB | Download |
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md5:a960f29341077f1d2852c71608363011
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7.6 kB | Download |
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md5:bee13d226ade9b4fa7c6a60f8a9b3afb
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24.4 kB | Download |
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md5:569907d6eb29295458e9e50ece981bdf
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4.4 kB | Download |
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md5:d7e0ef8fec587257d245853f221e410c
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47.6 kB | Download |
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md5:794f335909f05ee13fe7c47487d3fccc
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4.8 kB | Download |
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md5:5ba286bf216f8903f92541230c0fb583
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15.2 kB | Download |
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md5:9c1cb3df2260c3e196f0283641b278c3
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5.1 kB | Download |
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md5:39a470eb56ffce15cbdfc5ca4fb22759
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24.2 kB | Download |
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md5:e3a277dd29e2b7ddc40622441ca8532e
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563.0 kB | Download |
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md5:b7d2cecd263fb4d1598ec8c9e469fe4c
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3.9 kB | Download |
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md5:0a4149ee8cc19b764bd406261d191aac
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3.6 kB | Download |
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md5:7ca64fe72747502c40216203c086a14f
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33.9 kB | Download |
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md5:7c8722fba8be517390183be0c928ab05
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98.6 kB | Download |
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md5:2f26fb668db97291e7c6dada445961ab
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9.4 kB | Download |
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md5:5e19fe29a621695d04e213397db2653e
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2.3 kB | Download |
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md5:f788657737738028959293c6f4de1d39
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11.6 kB | Download |
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md5:c97341162d022c542f311f35a3a21504
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2.6 kB | Download |
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md5:aea7d51dd667aed95e26046a6528c23a
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12.8 kB | Download |
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md5:52dbf047430416fa1331518ecc651173
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4.5 kB | Download |
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md5:80745b6b3f261bdedad1313c3a37be52
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4.9 kB | Download |
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md5:0676164bd7a81d43d1083e206d581077
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8.6 kB | Download |
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md5:45e39fedbdde9f84fa838697c854c79e
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334.5 kB | Download |
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md5:4601813230f3bafecc66cd2bdc7f77f6
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72.3 kB | Download |
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md5:f6e843a11e695db0701aa5c569ef4aad
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90.8 kB | Download |
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md5:6af6bff5b2a934e8af236486dc4ac108
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8.5 kB | Download |