Published July 25, 2019
| Version 0.4.0
Software
Open
GAlibrate: Model calibration using Genetic Algorithm optimization in Python.
Authors/Creators
Description
GAlibrate is a python toolkit that provides an easy to use interface for model calibration/parameter estimation using an implementation of continuous genetic algorithm-based optimization. Although GAlibrate provides a general framework for running continuous genetic algorithm-based optimizations, it was created with systems biology models in mind. It therefore supplies additional tools for working with biological models in the PySB format.
Notes
v0.4.0 includes improvements to the Numba and Cython versions of the core GA which improve efficiency and increase their speed.
Files
blakeaw/GAlibrate-v0.4.0.zip
Files
(33.9 kB)
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md5:7e4789679e95fefe22b2bec3209953f9
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Additional details
Related works
- Is supplement to
- https://github.com/blakeaw/GAlibrate/tree/v0.4.0 (URL)