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Published July 21, 2019 | Version v.0.9.3
Software Open

Neurosim-lab/netpyne: v0.9.3

Authors/Creators

  • 1. University College London
  • 2. @EyeSeeTea
  • 3. @MetaCell
  • 4. SUNY Downstate
  • 5. The Kerr Lab
  • 6. @MetaCell @openworm
  • 7. @MetaCell @feup
  • 8. @Neurosim-lab
  • 9. Yale
  • 10. UCD Neuromuscular Systems and Neural Engineering Lab

Description

Version 0.9.3

  • Improved conversion from SONATA format, including 300 biophys cell example

  • Added saveCellConns, pt3dRelativeToCellLocation and invertedYCoord cfg options

  • Added lineWidth as argument of plotRatePSD() and plotLFP()

  • Modified plotLFP and plotRatePSD to use Morlet wavelet for PSD calculation

  • Added lineWidth argument to some raster and LFP plots

  • Added shuffling test to granger causality functions

  • Fixed bug plotting traces with one fig per trace

  • Fixed bug in granger functions - required conversion to int

  • Fixed bug in plotShape when cells sections not available

  • Return meaningful cell info via 'repr' and 'str' for pointCell, compartCell

  • Fixed spelling typos in documentation

Files

Neurosim-lab/netpyne-v.0.9.3.zip

Files (27.0 MB)

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md5:6108ea9013f34ae3dae97fba5b093bcf
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Additional details

Related works

Is supplement to
https://github.com/Neurosim-lab/netpyne/tree/v.0.9.3 (URL)