Published November 6, 2015 | Version v1
Software Open

HiCUP: pipeline for mapping and processing Hi-C data

Authors/Creators

  • 1. Bioinformatics Group, The Babraham Institute, Cambridge UK; Nuclear Dynamics Programme, The Babraham Institute, Cambridge UK
  • 2. Epigenetics Programme, The Babraham Institute, Cambridge UK
  • 3. Nuclear Dynamics Programme, The Babraham Institute, Cambridge UK
  • 4. Bioinformatics Group, The Babraham Institute, Cambridge UK

Description

HiCUP is a bioinformatics pipeline for processing Hi-C data. 

For full instructions on how to use HiCUP please read the markdown files (text format) in the 'Documentation' folder (we suggest you begin by reading the 'overview.md' file). Full documentation is also provided on the HiCUP homepage at:

http://www.bioinformatics.babraham.ac.uk/projects/hicup

Files

README.txt

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