There is a newer version of the record available.

Published February 19, 2019 | Version v2
Journal article Open

Gromos POPG Bilayer Simulation (Last 100 ns, 150 mM NaCl, 310 K )

Authors/Creators

  • 1. University of Porto

Description

Simulation of a POPG bilayer of 500 lipids (250 per leaflet) is simulated for 500 ns using Gromacs v5.1.2 in water solution with Na+ counterions and 150 mM of NaCl. The GROMOS-CKP-POPG-Tom_Piggot-v1 model wiht GROMOS57a7  is employed for lipids and the SCP model for water.

Trajectory (.xtc) is for the last 100 ns of a simulation of 500 ns with data saved every 10 ps. Additionally, the topology (.top), simulation parameter file (.mdp), and the energy output file (.edr) are provided.

Files

Files (3.9 GB)

Name Size Download all
md5:3e19c0a6067966755bf8109f1e73766f
4.6 MB Download
md5:1c46fce5e94cdad576e8506b3bb98a69
3.8 GB Download
md5:d9baa9178b96528b4bbce0663125351f
2.9 MB Download
md5:d74ade03cd31facf47446c406f4f70fd
33.0 MB Download
md5:294c53a6a0f8f3177470349096c6ecc1
1.4 kB Download
md5:d5dfe3b907f4540be8550d4a8437c47e
510 Bytes Download