Published May 18, 2019 | Version v1
Journal article Open

Model-based analysis of response and resistance factors of cetuximab treatment in gastric cancer cell lines

Authors/Creators

  • 1. Helmholtz Zentrum München, Technische Universität München
  • 2. Technische Universität München
  • 3. Biomax Informatics AG
  • 4. Helmholtz Zentrum München, Technische Universität München, Faculty of Mathematics and Natural Sciences University of Bonn

Description

This repository includes all the scripts used for parameterization, the models and the raw experimental data used for the fitting in the /ParameterEstimation directory. We also include a /VisualizationCode folder containing all the scripts and workspaces for figure generation (main manuscript and supplementary material). All the code is executed in MATLAB.

We provide here the SBML model in the /SBML directory.

We keep it very simple for users!

  • Executing mainParameterEstimation.m will perform all the analysis shown in the manuscript.
  • Executing generateFigures.m will perform all the figures shown in the manuscript.

Files

manuscriptCode.zip

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